2ED6
Crystal Structure of Envelope Protein VP28 from White Spot Syndrome Virus (WSSV)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D | SCOP2B Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2B (2022-06-29) |
A | SCOP2 Family | WSSV envelope protein-like | 8021537 | 4001723 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | WSSV envelope protein-like | 8033917 | 3000298 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | WSS_VP | e2ed6D1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
E | WSS_VP | e2ed6E1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
H | WSS_VP | e2ed6H1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
J | WSS_VP | e2ed6J1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
K | WSS_VP | e2ed6K1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
L | WSS_VP | e2ed6L1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
A | WSS_VP | e2ed6A1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
B | WSS_VP | e2ed6B1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
C | WSS_VP | e2ed6C1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
F | WSS_VP | e2ed6F1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
G | WSS_VP | e2ed6G1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
I | WSS_VP | e2ed6I1 | A: beta sandwiches | X: WSSV envelope protein-like (From Topology) | H: WSSV envelope protein-like (From Topology) | T: WSSV envelope protein-like | F: WSS_VP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12175 | White spot syndrome virus structural envelope protein VP (WSS_VP) | White spot syndrome virus structural envelope protein VP | This family of proteins is found in viruses. Proteins in this family are approximately 210 amino acids in length. There is a conserved NNT sequence motif. These proteins are structural envelope proteins in viruses. This is the beta barrel C terminal ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
25kDa structural protein VP25 | - | - |