2E0Z
Crystal structure of virus-like particle from Pyrococcus furiosus
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Phage coat protein-like | 8107810 | 3001529 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Linocin M18-like | 8107809 | 4004781 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Phage coat protein-like | 8107810 | 3001529 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Phage coat protein-like | 8107810 | 3001529 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Linocin_M18 | e2e0zA1 | A: a+b three layers | X: Thioredoxin-like | H: Major capsid protein gp5 (From Topology) | T: Major capsid protein gp5 | F: Linocin_M18 | ECOD (1.6) |
B | Linocin_M18 | e2e0zB1 | A: a+b three layers | X: Thioredoxin-like | H: Major capsid protein gp5 (From Topology) | T: Major capsid protein gp5 | F: Linocin_M18 | ECOD (1.6) |
C | Linocin_M18 | e2e0zC1 | A: a+b three layers | X: Thioredoxin-like | H: Major capsid protein gp5 (From Topology) | T: Major capsid protein gp5 | F: Linocin_M18 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.2400.20 | Alpha Beta | 2-Layer Sandwich | Major capsid protein gp5 fold | CATH (4.3.0) | |
A | 6.20.370.90 | Special | Other non-globular | Rhinovirus 14, subunit 4 | CATH (4.3.0) | |
A | 3.30.2320.10 | Alpha Beta | 2-Layer Sandwich | hypothetical protein PF0899 fold | hypothetical protein PF0899 domain | CATH (4.3.0) |
B | 3.30.2400.20 | Alpha Beta | 2-Layer Sandwich | Major capsid protein gp5 fold | CATH (4.3.0) | |
B | 6.20.370.90 | Special | Other non-globular | Rhinovirus 14, subunit 4 | CATH (4.3.0) | |
B | 3.30.2320.10 | Alpha Beta | 2-Layer Sandwich | hypothetical protein PF0899 fold | hypothetical protein PF0899 domain | CATH (4.3.0) |
C | 3.30.2400.20 | Alpha Beta | 2-Layer Sandwich | Major capsid protein gp5 fold | CATH (4.3.0) | |
C | 6.20.370.90 | Special | Other non-globular | Rhinovirus 14, subunit 4 | CATH (4.3.0) | |
C | 3.30.2320.10 | Alpha Beta | 2-Layer Sandwich | hypothetical protein PF0899 fold | hypothetical protein PF0899 domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04454 | Encapsulating protein for peroxidase (Linocin_M18) | Encapsulating protein for peroxidase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009078 | Ferritin-like superfamily | Homologous Superfamily | |
IPR007544 | Type 1 encapsulin shell protein | Family | |
IPR051429 | Encapsulin nanocompartment | Family | |
IPR003251 | Rubrerythrin, diiron-binding domain | Domain |