2CWG
CRYSTALLOGRAPHIC REFINEMENT AND STRUCTURE ANALYSIS OF THE COMPLEX OF WHEAT GERM AGGLUTININ WITH A BIVALENT SIALOGLYCOPEPTIDE FROM GLYCOPHORIN A
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2cwga1 | Small proteins | Knottins (small inhibitors, toxins, lectins) | Plant lectins/antimicrobial peptides | Hevein-like agglutinin (lectin) domain | Wheat germ agglutinin (WGA) | (Triticum aestivum ) [TaxId: 4565 ], | SCOPe (2.08) |
C [auth B] | d2cwgb1 | Small proteins | Knottins (small inhibitors, toxins, lectins) | Plant lectins/antimicrobial peptides | Hevein-like agglutinin (lectin) domain | Wheat germ agglutinin (WGA) | (Triticum aestivum ) [TaxId: 4565 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Chitin_bind_1 | e2cwgA1 | A: few secondary structure elements | X: omega toxin-like | H: omega toxin-related | T: Plant lectins/antimicrobial peptides | F: Chitin_bind_1 | ECOD (1.6) |
C [auth B] | Chitin_bind_1 | e2cwgB1 | A: few secondary structure elements | X: omega toxin-like | H: omega toxin-related | T: Plant lectins/antimicrobial peptides | F: Chitin_bind_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.60.10 | Alpha Beta | 2-Layer Sandwich | Wheat Germ Agglutinin (Isolectin 2) | domain 1 | CATH (4.3.0) |
C [auth B] | 3.30.60.10 | Alpha Beta | 2-Layer Sandwich | Wheat Germ Agglutinin (Isolectin 2) | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF00187 | Chitin recognition protein (Chitin_bind_1) | Chitin recognition protein | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, C [auth B] | AGGLUTININ ISOLECTIN 1 (WGA1) | - | - | |
B [auth D], D [auth E] | T5 SIALOGLYCOPEPTIDE OF GLYCOPHORIN A | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B] | IPR001002 | Chitin-binding, type 1 | Domain |
A, C [auth B] | IPR018371 | Chitin-binding, type 1, conserved site | Conserved Site |
A, C [auth B] | IPR036861 | Endochitinase-like superfamily | Homologous Superfamily |