2BF5

Crystal structure of a toluene 4-monooxygenase catalytic effector protein variant missing four N-terminal residues (delta-N4 T4moD)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2bf5b_	Alpha and beta proteins (a+b)	Monooxygenase (hydroxylase) regulatory protein	Monooxygenase (hydroxylase) regulatory protein	Monooxygenase (hydroxylase) regulatory protein	automated matches	(Ectopseudomonas mendocina ) [TaxId: 300 ],	SCOPe (2.08)
A	d2bf5a_	Alpha and beta proteins (a+b)	Monooxygenase (hydroxylase) regulatory protein	Monooxygenase (hydroxylase) regulatory protein	Monooxygenase (hydroxylase) regulatory protein	automated matches	(Ectopseudomonas mendocina ) [TaxId: 300 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Monooxygenase (hydroxylase) regulatory protein	8037949	3000674	SCOP2B (2022-06-29)
A	SCOP2 Family	Monooxygenase (hydroxylase) regulatory protein	8025570	4002004	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Monooxygenase (hydroxylase) regulatory protein	8037949	3000674	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	MmoB_DmpM	e2bf5B1	A: a+b two layers	X: Alpha-beta plaits	H: Monooxygenase (hydroxylase) regulatory protein (From Topology)	T: Monooxygenase (hydroxylase) regulatory protein	F: MmoB_DmpM	ECOD (1.6)
A	MmoB_DmpM	e2bf5A1	A: a+b two layers	X: Alpha-beta plaits	H: Monooxygenase (hydroxylase) regulatory protein (From Topology)	T: Monooxygenase (hydroxylase) regulatory protein	F: MmoB_DmpM	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.90.56.10	Alpha Beta	Alpha-Beta Complex	Phenol Hydroxylase P2 Protein	Monooxygenase component MmoB/DmpM	CATH (4.3.0)
A	3.90.56.10	Alpha Beta	Alpha-Beta Complex	Phenol Hydroxylase P2 Protein	Monooxygenase component MmoB/DmpM	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF02406	MmoB/DmpM family (MmoB_DmpM)	MmoB/DmpM family	This family consists of monooxygenase components such as MmoB methane monooxygenase (EC:1.14.13.25) regulatory protein B. When MmoB is present at low concentration it converts methane monooxygenase from an oxidase to a hydroxylase and stabilises inte ...	This family consists of monooxygenase components such as MmoB methane monooxygenase (EC:1.14.13.25) regulatory protein B. When MmoB is present at low concentration it converts methane monooxygenase from an oxidase to a hydroxylase and stabilises intermediates required for the activation of dioxygen [1]. Also found in this family is DmpM or Phenol hydroxylase (EC:1.14.13.7) protein component P2, this protein lacks redox co-factors and is required for optimal turnover of Phenol hydroxylase [3].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	TOLUENE-4-MONOOXYGENASE SYSTEM PROTEIN D	monooxygenase activity oxidoreductase activity catalytic activity	cellular response to stimulus catabolic process benzene-containing compound metabolic process response to stimulus hydrocarbon catabolic process cellular response to xenobiotic stimulus cellular metabolic process toluene-containing compound metabolic process xenobiotic catabolic process hydrocarbon metabolic process xenobiotic metabolic process response to xenobiotic stimulus cellular catabolic process cellular response to chemical stimulus response to chemical cellular response to stimulus catabolic process benzene-containing compound metabolic process response to stimulus hydrocarbon catabolic process cellular response to xenobiotic stimulus cellular metabolic process toluene-containing compound metabolic process xenobiotic catabolic process hydrocarbon metabolic process xenobiotic metabolic process response to xenobiotic stimulus cellular catabolic process cellular response to chemical stimulus response to chemical toluene catabolic process metabolic process cellular process toluene metabolic process toluene-containing compound catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR036889	Monooxygenase component MmoB/DmpM superfamily	Homologous Superfamily
A, B	IPR003454	Monooxygenase component MmoB/DmpM	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.