2BEO
PrfA, Transcriptional Regulator In Listeria Monocytogenes
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2beoa1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | CAP C-terminal domain-like | automated matches | (Listeria monocytogenes EGD-e ) [TaxId: 169963 ], | SCOPe (2.08) |
A | d2beoa2 | All beta proteins | Double-stranded beta-helix | cAMP-binding domain-like | Listeriolysin regulatory protein PrfA, N-terminal domain | automated matches | (Listeria monocytogenes EGD-e ) [TaxId: 169963 ], | SCOPe (2.08) |
B | d2beob1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | CAP C-terminal domain-like | automated matches | (Listeria monocytogenes EGD-e ) [TaxId: 169963 ], | SCOPe (2.08) |
B | d2beob2 | All beta proteins | Double-stranded beta-helix | cAMP-binding domain-like | Listeriolysin regulatory protein PrfA, N-terminal domain | automated matches | (Listeria monocytogenes EGD-e ) [TaxId: 169963 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8017649 | 3000034 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | cAMP-binding domain-like | 8017652 | 3000084 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | cAMP-binding domain-like | 8017652 | 3000084 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Winged helix DNA-binding domain | 8017649 | 3000034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | cNMP_binding | e2beoA1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: cNMP_binding | ECOD (1.6) |
A | HTH_Crp_2 | e2beoA2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_Crp_2 | ECOD (1.6) |
B | cNMP_binding | e2beoB1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: cNMP_binding | ECOD (1.6) |
B | HTH_Crp_2 | e2beoB2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_Crp_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
A | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
B | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
B | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
LISTERIOLYSIN REGULATORY PROTEIN | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018335 | Transcription regulator HTH, Crp-type, conserved site | Conserved Site | |
IPR018490 | Cyclic nucleotide-binding domain superfamily | Homologous Superfamily | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR012318 | Crp-type HTH domain | Domain | |
IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |