X-ray structure of succinylglutamate desuccinalase from Vibrio Parahaemolyticus (RIMD 2210633) at the resolution 2.3 A, Northeast Structural Genomics Target Vpr14
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2bcob_ | Alpha and beta proteins (a/b) | Phosphorylase/hydrolase-like | Zn-dependent exopeptidases | AstE/AspA-like | Succinylglutamate desuccinylase AstE | (Vibrio parahaemolyticus ) [TaxId: 670 ], | SCOPe (2.08) |
| A | d2bcoa1 | Alpha and beta proteins (a/b) | Phosphorylase/hydrolase-like | Zn-dependent exopeptidases | AstE/AspA-like | Succinylglutamate desuccinylase AstE | (Vibrio parahaemolyticus ) [TaxId: 670 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Zn-dependent exopeptidases | 8037848 | 3000662 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | AstE/AspA-like | 8025469 | 4003075 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Zn-dependent exopeptidases | 8037848 | 3000662 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | HSP20 | e2bcoB2 | A: beta barrels | X: POZ domain | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: HSP20 | ECOD (v294.2) |
| A | Cupin_2 | e2bcoA2 | A: beta barrels | X: jelly-roll | H: Double-stranded beta-helix | T: Double-stranded beta-helix | F: Cupin_2 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.630.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | Zn peptidases | CATH (4.3.0) |
| A | 3.40.630.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | Zn peptidases | CATH (4.3.0) |
| A | 2.40.50.630 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Succinylglutamate desuccinylase |
| - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR007036 | AstE/AspA barrel-sandwich hybrid domain | Domain | |
| IPR016681 | Succinylglutamate desuccinylase | Family | |
| IPR050178 | AspA/AstE family | Family | |
| IPR055438 | Succinylglutamate desuccinylase/Aspartoacylase, catalytic domain | Domain |














