2B5F
Crystal structure of the spinach aquaporin SoPIP2;1 in an open conformation to 3.9 resolution
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Aquaporin-like | 8072772 | 3000508 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Aquaporin-like | 8072772 | 3000508 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Aquaporin-like | 8072772 | 3000508 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Aquaporin-like | 8072772 | 3000508 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MIP | e2b5fA1 | A: alpha complex topology | X: Aquaporin-like (From Topology) | H: Aquaporin-like (From Topology) | T: Aquaporin-like | F: MIP | ECOD (1.6) |
B | MIP | e2b5fB1 | A: alpha complex topology | X: Aquaporin-like (From Topology) | H: Aquaporin-like (From Topology) | T: Aquaporin-like | F: MIP | ECOD (1.6) |
C | MIP | e2b5fC1 | A: alpha complex topology | X: Aquaporin-like (From Topology) | H: Aquaporin-like (From Topology) | T: Aquaporin-like | F: MIP | ECOD (1.6) |
D | MIP | e2b5fD1 | A: alpha complex topology | X: Aquaporin-like (From Topology) | H: Aquaporin-like (From Topology) | T: Aquaporin-like | F: MIP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1080.10 | Mainly Alpha | Up-down Bundle | Glycerol uptake facilitator protein | Glycerol uptake facilitator protein. | CATH (4.3.0) |
B | 1.20.1080.10 | Mainly Alpha | Up-down Bundle | Glycerol uptake facilitator protein | Glycerol uptake facilitator protein. | CATH (4.3.0) |
C | 1.20.1080.10 | Mainly Alpha | Up-down Bundle | Glycerol uptake facilitator protein | Glycerol uptake facilitator protein. | CATH (4.3.0) |
D | 1.20.1080.10 | Mainly Alpha | Up-down Bundle | Glycerol uptake facilitator protein | Glycerol uptake facilitator protein. | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
aquaporin | - |
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Major Intrinsic Protein (MIP)/FNT superfamily | Major intrinsic protein (MIP) family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Aquaporins and Glyceroporins | PIP2;1 plant aquaporin (closed conformation) |