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 29IW | pdb_000029iw

Human monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
OA [auth DA]28S rRNA---
PA [auth DB]5S rRNA---
QA [auth DC]5.8S rRNA---
I [auth AI]60S ribosomal protein L13a
H [auth AH]60S ribosomal protein L15
G [auth AG]60S ribosomal protein L14
F [auth AF]60S ribosomal protein L13
E [auth AE]60S ribosomal protein L11
RA [auth DD]Large ribosomal subunit protein uL2
NA [auth BD]Large ribosomal subunit protein eL6
D [auth AD]Ribosomal protein uL16-like
MA [auth BC]60S ribosomal protein L5
LA [auth BB]60S ribosomal protein L4
KA [auth BA]Large ribosomal subunit protein uL3
JA [auth Aj]60S ribosomal protein L28
IA [auth Ai]60S ribosomal protein L37a
HA [auth Ah]60S ribosomal protein L36a
GA [auth Ag]Large ribosomal subunit protein eL40
FA [auth Af]60S ribosomal protein L39
EA [auth Ae]60S ribosomal protein L38
DA [auth Ad]Large ribosomal subunit protein eL37
C [auth AC]60S ribosomal protein L9
CA [auth Ac]60S ribosomal protein L36
BA [auth Ab]60S ribosomal protein L35
AA [auth Aa]60S ribosomal protein L34
Z [auth AZ]Large ribosomal subunit protein eL33
Y [auth AY]60S ribosomal protein L32
X [auth AX]60S ribosomal protein L31
W [auth AW]60S ribosomal protein L30
V [auth AV]60S ribosomal protein L29
U [auth AU]Large ribosomal subunit protein uL15
T [auth AT]60S ribosomal protein L27
B [auth AB]60S ribosomal protein L7a
S [auth AS]60S ribosomal protein L26
R [auth AR]60S ribosomal protein L23a
Q [auth AQ]60S ribosomal protein L24
P [auth AP]60S ribosomal protein L23
O [auth AO]60S ribosomal protein L22
N [auth AN]60S ribosomal protein L21
M [auth AM]60S ribosomal protein L18a
L [auth AL]60S ribosomal protein L19
K [auth AK]60S ribosomal protein L18
J [auth AJ]60S ribosomal protein L17
A [auth AA]Large ribosomal subunit protein uL30

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth AI]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
I [auth AI]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
I [auth AI]IPR005822Large ribosomal subunit protein uL13Family
I [auth AI]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
H [auth AH]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
H [auth AH]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
H [auth AH]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
H [auth AH]IPR000439Large ribosomal subunit protein eL15Family
G [auth AG]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
G [auth AG]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
G [auth AG]IPR039660Large ribosomal subunit protein eL14Family
G [auth AG]IPR002784Large ribosomal subunit protein eL14 domainDomain
F [auth AF]IPR001380Large ribosomal subunit protein eL13Family
F [auth AF]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
E [auth AE]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
E [auth AE]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
E [auth AE]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
E [auth AE]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
E [auth AE]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
E [auth AE]IPR002132Large ribosomal subunit protein uL5Family
RA [auth DD]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
RA [auth DD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
RA [auth DD]IPR002171Large ribosomal subunit protein uL2Family
RA [auth DD]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
RA [auth DD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RA [auth DD]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
RA [auth DD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
RA [auth DD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
RA [auth DD]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
NA [auth BD]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
NA [auth BD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NA [auth BD]IPR000915Large ribosomal subunit protein eL6Family
NA [auth BD]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
NA [auth BD]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
NA [auth BD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth AD]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
D [auth AD]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
D [auth AD]IPR047873Large ribosomal subunit protein uL16Family
D [auth AD]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
D [auth AD]IPR016180Large ribosomal subunit protein uL16 domainDomain
MA [auth BC]IPR057268Large ribosomal subunit protein uL18Family
MA [auth BC]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
MA [auth BC]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
LA [auth BB]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
LA [auth BB]IPR002136Large ribosomal subunit protein uL4Family
LA [auth BB]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
LA [auth BB]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
LA [auth BB]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
KA [auth BA]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
KA [auth BA]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
KA [auth BA]IPR000597Large ribosomal subunit protein uL3Family
KA [auth BA]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
KA [auth BA]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
JA [auth Aj]IPR029004Ribosomal eL28/Mak16Domain
JA [auth Aj]IPR002672Large ribosomal subunit protein eL28Family
IA [auth Ai]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
IA [auth Ai]IPR002674Large ribosomal subunit protein eL43Family
IA [auth Ai]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth Ah]IPR000552Large ribosomal subunit protein eL42Family
HA [auth Ah]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
HA [auth Ah]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GA [auth Ag]IPR019954Ubiquitin conserved siteConserved Site
GA [auth Ag]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
GA [auth Ag]IPR050158Ubiquitin and ubiquitin-likeFamily
GA [auth Ag]IPR000626Ubiquitin-like domainDomain
GA [auth Ag]IPR019956Ubiquitin domainDomain
GA [auth Ag]IPR001975Large ribosomal subunit protein eL40 domainDomain
GA [auth Ag]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
FA [auth Af]IPR000077Large ribosomal subunit protein eL39Family
FA [auth Af]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
FA [auth Af]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
EA [auth Ae]IPR002675Large ribosomal subunit protein eL38Family
EA [auth Ae]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
DA [auth Ad]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
DA [auth Ad]IPR001569Large ribosomal subunit protein eL37Family
DA [auth Ad]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
DA [auth Ad]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
C [auth AC]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
C [auth AC]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
C [auth AC]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
C [auth AC]IPR000702Large ribosomal subunit protein uL6-likeFamily
CA [auth Ac]IPR000509Large ribosomal subunit protein eL36Family
CA [auth Ac]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
BA [auth Ab]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
BA [auth Ab]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
BA [auth Ab]IPR001854Large ribosomal subunit protein uL29Family
BA [auth Ab]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
AA [auth Aa]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
AA [auth Aa]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
AA [auth Aa]IPR008195Large ribosomal subunit protein eL34Family
Z [auth AZ]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
Z [auth AZ]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
Z [auth AZ]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
Z [auth AZ]IPR001780Large ribosomal subunit protein eL33Family
Y [auth AY]IPR001515Large ribosomal subunit protein eL32Family
Y [auth AY]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
Y [auth AY]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
X [auth AX]IPR000054Large ribosomal subunit protein eL31Family
X [auth AX]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
X [auth AX]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
W [auth AW]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
W [auth AW]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
W [auth AW]IPR000231Large ribosomal subunit protein eL30Family
W [auth AW]IPR039109Large ribosomal subunit protein eL30-likeFamily
W [auth AW]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
V [auth AV]IPR002673Large ribosomal subunit protein eL29Family
U [auth AU]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
U [auth AU]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
U [auth AU]IPR021131Large ribosomal subunit protein uL15/eL18Domain
U [auth AU]IPR030878Large ribosomal subunit protein uL15Family
U [auth AU]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
T [auth AT]IPR001141Large ribosomal subunit protein eL27Family
T [auth AT]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
T [auth AT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth AT]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
T [auth AT]IPR005824KOWDomain
T [auth AT]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
B [auth AB]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
B [auth AB]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
B [auth AB]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
B [auth AB]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
B [auth AB]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
B [auth AB]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
S [auth AS]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
S [auth AS]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
S [auth AS]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
S [auth AS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
S [auth AS]IPR005824KOWDomain
S [auth AS]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
R [auth AR]IPR019985Large ribosomal subunit protein uL23Family
R [auth AR]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
R [auth AR]IPR013025Large ribosomal subunit protein uL23-likeFamily
R [auth AR]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
R [auth AR]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
R [auth AR]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
Q [auth AQ]IPR011017TRASH domainDomain
Q [auth AQ]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
Q [auth AQ]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Q [auth AQ]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
Q [auth AQ]IPR056366Large ribosomal subunit protein eL24Family
P [auth AP]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
P [auth AP]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
P [auth AP]IPR000218Large ribosomal subunit protein uL14Family
O [auth AO]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
O [auth AO]IPR002671Large ribosomal subunit protein eL22Family
N [auth AN]IPR001147Large ribosomal subunit protein eL21Family
N [auth AN]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
N [auth AN]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
N [auth AN]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
M [auth AM]IPR028877Large ribosomal subunit protein eL20Family
M [auth AM]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
M [auth AM]IPR023573Large ribosomal subunit protein eL20 domainDomain
L [auth AL]IPR039547Large ribosomal subunit protein eL19Family
L [auth AL]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
L [auth AL]IPR057260Ribosomal protein L19e, C-terminal domainDomain
L [auth AL]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
L [auth AL]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
L [auth AL]IPR057259Ribosomal protein L19e, N-terminal domainDomain
L [auth AL]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
L [auth AL]IPR000196Large ribosomal subunit protein eL19 domainDomain
K [auth AK]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
K [auth AK]IPR000039Large ribosomal subunit protein eL18Family
K [auth AK]IPR021131Large ribosomal subunit protein uL15/eL18Domain
K [auth AK]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
J [auth AJ]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
J [auth AJ]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
J [auth AJ]IPR001063Large ribosomal subunit protein uL22Family
J [auth AJ]IPR057265Large ribosomal subunit protein uL22, archaeaFamily
J [auth AJ]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
A [auth AA]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
A [auth AA]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
A [auth AA]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
A [auth AA]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
A [auth AA]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
A [auth AA]IPR039699Large ribosomal subunit protein uL30Family
A [auth AA]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
I [auth AI]:  P40429
H [auth AH]:  P61313
G [auth AG]:  P50914
F [auth AF]:  P26373
E [auth AE]:  P62913
NA [auth BD]:  Q02878
D [auth AD]:  Q96L21
MA [auth BC]:  P46777
LA [auth BB]:  P36578
KA [auth BA]:  P39023
JA [auth Aj]:  P46779
IA [auth Ai]:  P61513
HA [auth Ah]:  P83881
GA [auth Ag]:  P62987
EA [auth Ae]:  P63173
DA [auth Ad]:  P61927
C [auth AC]:  P32969
CA [auth Ac]:  Q9Y3U8
BA [auth Ab]:  P42766
AA [auth Aa]:  P49207
Z [auth AZ]:  P18077
Y [auth AY]:  P62910
X [auth AX]:  P62899
W [auth AW]:  P62888
U [auth AU]:  P46776
T [auth AT]:  P61353
B [auth AB]:  P62424
S [auth AS]:  P61254
R [auth AR]:  P62750
Q [auth AQ]:  P83731
P [auth AP]:  P62829
O [auth AO]:  P35268
N [auth AN]:  P46778
L [auth AL]:  P84098
K [auth AK]:  Q07020
J [auth AJ]:  P18621
A [auth AA]:  P18124

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
OA [auth DA]1MA Parent Component: A

OA [auth DA]5MC Parent Component: C

OA [auth DA]6MZ Parent Component: A

OA [auth DA]A2M Parent Component: A

OA [auth DA]B8T Parent Component: C

OA [auth DA]OMC Parent Component: C

OA [auth DA]OMG Parent Component: G

OA [auth DA]OMU Parent Component: U

OA [auth DA]PSU Parent Component: U

OA [auth DA]UR3 Parent Component: U

OA [auth DA]UY1
QA [auth DC]OMG Parent Component: G

QA [auth DC]PSU Parent Component: U

RA [auth DD]V5N Parent Component: HIS

KA [auth BA]HIC Parent Component: HIS

:  AA0317

:  1'-methyl-L-histidine MOD:00322
GA [auth Ag]MLZ Parent Component: LYS

:  AA0317 , AA0076

:  1'-methyl-L-histidine MOD:00322 , N6-methyl-L-lysine MOD:00085
U [auth AU]V5N Parent Component: HIS

:  AA0317 , AA0076