Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members ...
This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members of this family are found in the mitochondria. It is predicted to have a mixed alpha/beta secondary structure.
The Omp85 protein superfamily contains bacterial outer membrane proteins, which can function as protein translocases or as membrane protein assembly factors [1]. The family includes the membrane bound beta barrel of proteins such as BamA and TamA fro ...
The Omp85 protein superfamily contains bacterial outer membrane proteins, which can function as protein translocases or as membrane protein assembly factors [1]. The family includes the membrane bound beta barrel of proteins such as BamA and TamA from E. coli.
Outer membrane protein assembly factor BamC-like C-terminal domain
This entry represents the C-terminal domain of BamC and related sequences. BamC is part of the outer membrane protein assembly Bam complex (composed of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE), which is involv ...
This entry represents the C-terminal domain of BamC and related sequences. BamC is part of the outer membrane protein assembly Bam complex (composed of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE), which is involved in assembly and insertion of beta-barrel proteins into the outer membrane [1-5]. E. coli BamC is a nonessential member of the Bam complex that stabilises the interaction between the essential proteins BamA and BamD [6]. This entry also includes NMB0928 from Neisseria meningitidis whose function is unknown.
Outer membrane protein assembly factor BamE domain
This domain is found in bacterial outer membrane lipoproteins probably involved in maintaining the structural integrity of the cell envelope [1], including Outer membrane protein assembly factor BamE from Vibrio cholerae (also known as SmpA). The lip ...
This domain is found in bacterial outer membrane lipoproteins probably involved in maintaining the structural integrity of the cell envelope [1], including Outer membrane protein assembly factor BamE from Vibrio cholerae (also known as SmpA). The lipid attachment site is a conserved N terminal cysteine residue. Sometimes found adjacent to the OmpA domain (Pfam:PF00691).