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 21WV | pdb_000021wv

In situ structure of the C2S2M2L4-type PSII-LHCII supercomplex from Oryza sativa

External Resource: Annotation


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Chlorophyll a-b binding protein 2, chloroplastic-
L [auth 12],
O [auth 15],
R [auth 18],
SB [auth 21]		Chlorophyll a-b binding protein, chloroplastic-
SA [auth 1a],
T [auth 1A]		Photosystem II protein D1
TA [auth 1b],
U [auth 1B]		Photosystem II CP47 reaction center protein
UA [auth 1c],
V [auth 1C]		Photosystem II CP43 reaction center protein
XA [auth 1f],
Y [auth 1F]		Cytochrome b559 subunit beta
AA [auth 1H],
ZA [auth 1h]		Photosystem II reaction center protein H
AB [auth 1i],
BA [auth 1I]		Photosystem II reaction center protein I-
BB [auth 1j],
CA [auth 1J]		Photosystem II reaction center protein J-
DB [auth 1l],
EA [auth 1L]		Photosystem II reaction center protein L-
EB [auth 1m],
FA [auth 1M]		Photosystem II reaction center protein M-
GB [auth 1o],
HA [auth 1O]		33 kDa subunit of oxygen evolving system of photosystem II
HB [auth 1p],
IA [auth 1P]		23 kDa subunit of oxygen evolving system of photosystem II
IB [auth 1r],
JA [auth 1R]		Chlorophyll a-b binding protein, chloroplastic
JB [auth 1s],
KA [auth 1S]		Chlorophyll a-b binding protein, chloroplastic-
KB [auth 1t],
LA [auth 1T]		Photosystem II reaction center protein T-
LB [auth 1u],
MA [auth 1U]		Os02g0581100 protein- - -
NB [auth 1w],
OA [auth 1W]		Photosystem II reaction center W protein, chloroplastic-
OB [auth 1x],
PA [auth 1X]		Os07g0673550 protein-
PB [auth 1y],
QA [auth 1Y]		Os08g0119800 protein
VA [auth 1d],
W [auth 1D]		Photosystem II D2 protein
M [auth 13],
P [auth 16],
S [auth 19],
TB [auth 22]		Chlorophyll a-b binding protein 1, chloroplastic-
E [auth 04],
I [auth 08]		Chlorophyll a-b binding protein, chloroplastic-
QB [auth 1z],
RA [auth 1Z]		Photosystem II reaction center protein Z-
MB [auth 1v],
NA [auth 1V]		Photosystem II 10 kDa polypeptide, chloroplastic-
D [auth 03],
H [auth 07]		Chlorophyll a/b-binding protein- - -
CB [auth 1k],
DA [auth 1K]		Photosystem II reaction center protein K-
WA [auth 1e],
X [auth 1E]		Cytochrome b559 subunit alpha

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
IPR022796Chlorophyll A-B binding proteinFamily
L [auth 12],
O [auth 15],
R [auth 18],
SB [auth 21]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
L [auth 12],
O [auth 15],
R [auth 18],
SB [auth 21]		IPR022796Chlorophyll A-B binding proteinFamily
SA [auth 1a],
T [auth 1A]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
SA [auth 1a],
T [auth 1A]		IPR005867Photosystem II protein D1Family
SA [auth 1a],
T [auth 1A]		IPR000484Photosynthetic reaction centre, L/MFamily
SA [auth 1a],
T [auth 1A]		IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
SA [auth 1a],
T [auth 1A]		IPR055266Photosystem II protein D1/D2Family
TA [auth 1b],
U [auth 1B]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
TA [auth 1b],
U [auth 1B]		IPR000932Photosystem antenna protein-likeFamily
TA [auth 1b],
U [auth 1B]		IPR017486Photosystem II CP47 reaction centre proteinFamily
UA [auth 1c],
V [auth 1C]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
UA [auth 1c],
V [auth 1C]		IPR000932Photosystem antenna protein-likeFamily
UA [auth 1c],
V [auth 1C]		IPR005869Photosystem II CP43 reaction centre proteinFamily
UA [auth 1c],
V [auth 1C]		IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
XA [auth 1f],
Y [auth 1F]		IPR006241Photosystem II cytochrome b559, beta subunitFamily
XA [auth 1f],
Y [auth 1F]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
XA [auth 1f],
Y [auth 1F]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
AA [auth 1H],
ZA [auth 1h]		IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
AA [auth 1H],
ZA [auth 1h]		IPR001056Photosystem II reaction centre protein HFamily
AB [auth 1i],
BA [auth 1I]		IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
AB [auth 1i],
BA [auth 1I]		IPR003686Photosystem II PsbIFamily
BB [auth 1j],
CA [auth 1J]		IPR002682Photosystem II PsbJFamily
BB [auth 1j],
CA [auth 1J]		IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily
DB [auth 1l],
EA [auth 1L]		IPR003372Photosystem II PsbLFamily
DB [auth 1l],
EA [auth 1L]		IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
EB [auth 1m],
FA [auth 1M]		IPR007826Photosystem II PsbMFamily
EB [auth 1m],
FA [auth 1M]		IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
GB [auth 1o],
HA [auth 1O]		IPR011250Outer membrane protein/outer membrane enzyme PagP-like, beta-barrel superfamilyHomologous Superfamily
GB [auth 1o],
HA [auth 1O]		IPR002628Photosystem II extrinsic protein OFamily
HB [auth 1p],
IA [auth 1P]		IPR006311Twin-arginine translocation pathway, signal sequenceConserved Site
HB [auth 1p],
IA [auth 1P]		IPR002683PsbP, C-terminalDomain
HB [auth 1p],
IA [auth 1P]		IPR016123Mog1/PsbP, alpha/beta/alpha sandwichHomologous Superfamily
IB [auth 1r],
JA [auth 1R]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
IB [auth 1r],
JA [auth 1R]		IPR022796Chlorophyll A-B binding proteinFamily
JB [auth 1s],
KA [auth 1S]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
JB [auth 1s],
KA [auth 1S]		IPR022796Chlorophyll A-B binding proteinFamily
KB [auth 1t],
LA [auth 1T]		IPR001743Photosystem II PsbTFamily
KB [auth 1t],
LA [auth 1T]		IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
LB [auth 1u],
MA [auth 1U]		IPR040296Photosystem II 5kDa protein, chloroplasticFamily
NB [auth 1w],
OA [auth 1W]		IPR009806Photosystem II PsbW, class 2Family
OB [auth 1x],
PA [auth 1X]		IPR009518Photosystem II PsbXFamily
PB [auth 1y],
QA [auth 1Y]		IPR038760Photosystem II PsbY, plantFamily
PB [auth 1y],
QA [auth 1Y]		IPR009388Photosystem II PsbYFamily
VA [auth 1d],
W [auth 1D]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
VA [auth 1d],
W [auth 1D]		IPR005868Photosystem II D2Family
VA [auth 1d],
W [auth 1D]		IPR000484Photosynthetic reaction centre, L/MFamily
VA [auth 1d],
W [auth 1D]		IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
VA [auth 1d],
W [auth 1D]		IPR055266Photosystem II protein D1/D2Family
M [auth 13],
P [auth 16],
S [auth 19],
TB [auth 22]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
M [auth 13],
P [auth 16],
S [auth 19],
TB [auth 22]		IPR022796Chlorophyll A-B binding proteinFamily
E [auth 04],
I [auth 08]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
E [auth 04],
I [auth 08]		IPR022796Chlorophyll A-B binding proteinFamily
QB [auth 1z],
RA [auth 1Z]		IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
QB [auth 1z],
RA [auth 1Z]		IPR002644Photosystem II PsbZ, reaction centreFamily
MB [auth 1v],
NA [auth 1V]		IPR006814Photosystem II PsbRFamily
D [auth 03],
H [auth 07]		IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
D [auth 03],
H [auth 07]		IPR022796Chlorophyll A-B binding proteinFamily
CB [auth 1k],
DA [auth 1K]		IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
CB [auth 1k],
DA [auth 1K]		IPR003687Photosystem II PsbKFamily
WA [auth 1e],
X [auth 1E]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
WA [auth 1e],
X [auth 1E]		IPR006217Photosystem II cytochrome b559, alpha subunitFamily
WA [auth 1e],
X [auth 1E]		IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
WA [auth 1e],
X [auth 1E]		IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
WA [auth 1e],
X [auth 1E]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site