1WMX
Crystal Structure of Family 30 Carbohydrate Binding Module
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1wmxa_ | All beta proteins | Galactose-binding domain-like | Galactose-binding domain-like | Family 30 carbohydrate binding module, CBM30 (PKD repeat) | Endoglucanase CelJ | (Acetivibrio thermocellus ATCC 27405 ) [TaxId: 203119 ], | SCOPe (2.08) |
B | d1wmxb_ | All beta proteins | Galactose-binding domain-like | Galactose-binding domain-like | Family 30 carbohydrate binding module, CBM30 (PKD repeat) | Endoglucanase CelJ | (Acetivibrio thermocellus ATCC 27405 ) [TaxId: 203119 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Family 30 carbohydrate binding module, cbm30 (pkd repeat) | 8029391 | 4001720 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | galactose-binding domain-like | 8041770 | 3000087 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | galactose-binding domain-like | 8041770 | 3000087 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF21582 | e1wmxA1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF21582 | ECOD (1.6) |
B | PF21582 | e1wmxB1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF21582 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.430 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding lectin | CATH (4.3.0) |
B | 2.60.120.430 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding lectin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21582 | Carbohydrate binding domain 30 (CBM30) | Carbohydrate binding domain 30 | This carbohydrate binding domain is found at the N-terminal end of Glycoside hydrolase family 9 (GH9) from Acetivibrio thermocellus (Swiss:A3DD30). This protein contains GH9 and GH44 as catalytic modules (Pfam:PF00759 and Pfam:PF12891). It also prese ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002105 | Dockerin type I repeat | Repeat | |
IPR016134 | Dockerin domain | Domain | |
IPR022409 | PKD/Chitinase domain | Domain | |
IPR000601 | PKD domain | Domain | |
IPR008928 | Six-hairpin glycosidase superfamily | Homologous Superfamily | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
IPR012341 | Six-hairpin glycosidase-like superfamily | Homologous Superfamily | |
IPR048758 | Carbohydrate binding domain 30 | Domain | |
IPR035986 | PKD domain superfamily | Homologous Superfamily | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR001701 | Glycoside hydrolase family 9 | Domain | |
IPR036439 | Dockerin domain superfamily | Homologous Superfamily | |
IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
IPR004197 | Cellulase, Ig-like domain | Domain | |
IPR024745 | Glycoside hydrolase, family 44 | Domain |