1UV7

periplasmic domain of EpsM from Vibrio cholerae

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1uv7a_	Alpha and beta proteins (a+b)	RRF/tRNA synthetase additional domain-like	General secretion pathway protein M, EpsM	General secretion pathway protein M, EpsM	General secretion pathway protein M, EpsM	(Vibrio cholerae ) [TaxId: 666 ],	SCOPe (2.08)
B	d1uv7b_	Alpha and beta proteins (a+b)	RRF/tRNA synthetase additional domain-like	General secretion pathway protein M, EpsM	General secretion pathway protein M, EpsM	General secretion pathway protein M, EpsM	(Vibrio cholerae ) [TaxId: 666 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	General secretion pathway protein M, EpsM	8022767	4001434	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	General secretion pathway protein M, EpsM-like	8035147	3001571	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	General secretion pathway protein M, EpsM-like	8035147	3001571	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	T2SSM	e1uv7A1	A: a+b two layers	X: RRF/tRNA synthetase additional domain-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related (From Topology)	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: T2SSM	ECOD (1.6)
B	T2SSM	e1uv7B1	A: a+b two layers	X: RRF/tRNA synthetase additional domain-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related (From Topology)	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: T2SSM	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.1360.100	Alpha Beta	2-Layer Sandwich	Gyrase A	domain 2	CATH (4.3.0)
B	3.30.1360.100	Alpha Beta	2-Layer Sandwich	Gyrase A	domain 2	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	GENERAL SECRETION PATHWAY PROTEIN M	-	protein localization protein transport across the cell outer membrane establishment of protein localization cellular localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization protein localization protein transport across the cell outer membrane establishment of protein localization cellular localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport cellular macromolecule localization macromolecule localization cellular process	cell periphery plasma membrane membrane cellular anatomical entity protein-containing complex type II protein secretion system complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR023229	Type II secretion system protein GspM, periplasmic domain superfamily	Homologous Superfamily
A, B	IPR007690	Type II secretion system protein GspM	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.