1YU4
Major Tropism Determinant U1 Variant
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8034885 | 3000915 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | C-type lectin-like | 8034887 | 3001261 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | C-type lectin-like | 8034887 | 3001261 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8034885 | 3000915 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | C-type lectin-like | 8034887 | 3001261 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Bacteriophage trimeric proteins domain | 8034885 | 3000915 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF21916 | e1yu4A2 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: PF21916 | ECOD (1.6) |
A | PF18454 | e1yu4A4 | A: beta duplicates or obligate multimers | X: Major tropism determinant (Mtd) trimerization domain-related (From Topology) | H: Major tropism determinant (Mtd) trimerization domain-related (From Topology) | T: Major tropism determinant (Mtd) trimerization domain-related | F: PF18454 | ECOD (1.6) |
A | F_UNCLASSIFIED | e1yu4A3 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: Sulfatase-modifying factor-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF21916 | e1yu4B2 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: PF21916 | ECOD (1.6) |
B | PF18454 | e1yu4B4 | A: beta duplicates or obligate multimers | X: Major tropism determinant (Mtd) trimerization domain-related (From Topology) | H: Major tropism determinant (Mtd) trimerization domain-related (From Topology) | T: Major tropism determinant (Mtd) trimerization domain-related | F: PF18454 | ECOD (1.6) |
B | F_UNCLASSIFIED | e1yu4B3 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: Sulfatase-modifying factor-like | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF21916 | e1yu4C2 | A: beta sandwiches | X: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | H: Lactophage receptor-binding protein N-terminal domain-like (From Topology) | T: Lactophage receptor-binding protein N-terminal domain-like | F: PF21916 | ECOD (1.6) |
C | PF18454 | e1yu4C4 | A: beta duplicates or obligate multimers | X: Major tropism determinant (Mtd) trimerization domain-related (From Topology) | H: Major tropism determinant (Mtd) trimerization domain-related (From Topology) | T: Major tropism determinant (Mtd) trimerization domain-related | F: PF18454 | ECOD (1.6) |
C | F_UNCLASSIFIED | e1yu4C3 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: Sulfatase-modifying factor-like | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21916 | Mtd second domain (mtd_2nd) | Mtd second domain | This entry represents the second domain of Mtd. The major tropism determinant (Mtd, 40 kDa), the receptor-binding protein of Bordetella bacteriophage, varies greatly in sequence. Variation in Mtd depends on a phage-encoded retroelement that belongs t ... | Domain | |
PF18454 | Major tropism determinant N-terminal domain (Mtd_N) | Major tropism determinant N-terminal domain | This is the N-terminal domain of major tropism determinant (Mtd), a retroelement-encoded receptor-binding protein. Mtd-N forms a three-fold symmetric beta-prism. This resembles the pseudo three-fold-symmetric beta-prisms of monocot lectins, but lacks ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR042095 | Sulfatase-modifying factor enzyme superfamily | Homologous Superfamily | |
IPR041352 | Major tropism determinant, N-terminal domain | Domain | |
IPR016187 | C-type lectin fold | Homologous Superfamily |