X-ray Crystal Structure of a Chemically Synthesized Ubiquitin
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d1yiwb1 | Designed proteins | Ubiquitin | Ubiquitin | Ubiquitin | Ubiquitin | ( ) [TaxId: ], (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
| B | d1yiwb2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | ( ) [TaxId: ], (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
| C | d1yiwc1 | Designed proteins | Ubiquitin | Ubiquitin | Ubiquitin | Ubiquitin | ( ) [TaxId: ], (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
| C | d1yiwc2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | ( ) [TaxId: ], (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
| A | d1yiwa1 | Designed proteins | Ubiquitin | Ubiquitin | Ubiquitin | Ubiquitin | ( ) [TaxId: ], (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
| A | d1yiwa2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | ( ) [TaxId: ], (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Sigma_1_2 | e1yiwB1 | A: beta barrels | X: HTH | H: Nudix | T: winged helix domain | F: Sigma_1_2 | ECOD (v294.2) |
| C | Sigma_1_2 | e1yiwC1 | A: beta barrels | X: HTH | H: Nudix | T: winged helix domain | F: Sigma_1_2 | ECOD (v294.2) |
| A | Sigma_1_2 | e1yiwA1 | A: beta barrels | X: HTH | H: Nudix | T: winged helix domain | F: Sigma_1_2 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
| C | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
| A | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR019956 | Ubiquitin domain | Domain | |
| IPR019954 | Ubiquitin conserved site | Conserved Site | |
| IPR050158 | Ubiquitin and ubiquitin-like | Family | |
| IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
| IPR000626 | Ubiquitin-like domain | Domain |














