1YCG
X-ray Structures of Moorella thermoacetica FprA. Novel Diiron Site Structure and Mechanistic Insights into a Scavenging Nitric Oxide Reductase
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | ROO N-terminal domain-like | 8021965 | 4002294 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Flavodoxin-related | 8021966 | 4003663 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Metallo-hydrolase/oxidoreductase | 8034345 | 3001057 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Flavoproteins | 8034346 | 3001217 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Flavoproteins | 8034346 | 3001217 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8034345 | 3001057 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Flavoproteins | 8034346 | 3001217 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8034345 | 3001057 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Flavoproteins | 8034346 | 3001217 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8034345 | 3001057 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Lactamase_B_1 | e1ycgA1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B_1 | ECOD (1.6) |
A | Flavodoxin_1 | e1ycgA2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: Flavoproteins | F: Flavodoxin_1 | ECOD (1.6) |
B | Lactamase_B_1 | e1ycgB1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B_1 | ECOD (1.6) |
B | Flavodoxin_1 | e1ycgB2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: Flavoproteins | F: Flavodoxin_1 | ECOD (1.6) |
C | Lactamase_B_1 | e1ycgC1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B_1 | ECOD (1.6) |
C | Flavodoxin_1 | e1ycgC2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: Flavoproteins | F: Flavodoxin_1 | ECOD (1.6) |
D | Lactamase_B_1 | e1ycgD1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B_1 | ECOD (1.6) |
D | Flavodoxin_1 | e1ycgD2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: Flavoproteins | F: Flavodoxin_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
A | 3.40.50.360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Flavodoxin domain | CATH (4.3.0) |
B | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
B | 3.40.50.360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Flavodoxin domain | CATH (4.3.0) |
C | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
C | 3.40.50.360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Flavodoxin domain | CATH (4.3.0) |
D | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
D | 3.40.50.360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Flavodoxin domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF19583 | ODP family beta lactamase (ODP) | ODP family beta lactamase | The ODP (Oxygen-binding Di-iron Protein) domain is a distinct member of the metallo-beta-lactamase superfamily recruited to various bacterial and archaeal signal transduction pathways, including chemotaxis, to function as oxygen and iron sensors (1). ... | Domain | |
PF00258 | Flavodoxin (Flavodoxin_1) | Flavodoxin | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR045761 | ODP domain | Domain | |
IPR016440 | Rubredoxin-oxygen oxidoreductase | Family | |
IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Homologous Superfamily | |
IPR029039 | Flavoprotein-like superfamily | Homologous Superfamily | |
IPR001279 | Metallo-beta-lactamase | Domain | |
IPR008254 | Flavodoxin/nitric oxide synthase | Domain |