Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1ycfa1 Alpha and beta proteins (a/b) Flavodoxin-like Flavoproteins Flavodoxin-related Nitric oxide reductase C-terminal domain (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
Ad1ycfa2 Alpha and beta proteins (a+b) Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase ROO N-terminal domain-like Nitric oxide reductase N-terminal domain (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
Bd1ycfb1 Alpha and beta proteins (a/b) Flavodoxin-like Flavoproteins automated matches automated matches (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
Bd1ycfb2 Alpha and beta proteins (a+b) Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase ROO N-terminal domain-like automated matches (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
Cd1ycfc1 Alpha and beta proteins (a/b) Flavodoxin-like Flavoproteins automated matches automated matches (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
Cd1ycfc2 Alpha and beta proteins (a+b) Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase ROO N-terminal domain-like automated matches (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
Dd1ycfd1 Alpha and beta proteins (a/b) Flavodoxin-like Flavoproteins automated matches automated matches (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
Dd1ycfd2 Alpha and beta proteins (a+b) Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase ROO N-terminal domain-like automated matches (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyMetallo-hydrolase/oxidoreductase 8034345 3001057 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyFlavoproteins 8034346 3001217 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFlavoproteins 8034346 3001217 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyMetallo-hydrolase/oxidoreductase 8034345 3001057 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyMetallo-hydrolase/oxidoreductase 8034345 3001057 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFlavoproteins 8034346 3001217 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyMetallo-hydrolase/oxidoreductase 8034345 3001057 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyFlavoproteins 8034346 3001217 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALactamase_B_1e1ycfA1 A: a+b four layersX: Metallo-hydrolase/oxidoreductase (From Topology)H: Metallo-hydrolase/oxidoreductase (From Topology)T: Metallo-hydrolase/oxidoreductaseF: Lactamase_B_1ECOD (1.6)
AFlavodoxin_1e1ycfA2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavoproteins/Phosphotyrosine protein phosphatases-likeT: FlavoproteinsF: Flavodoxin_1ECOD (1.6)
BLactamase_B_1e1ycfB1 A: a+b four layersX: Metallo-hydrolase/oxidoreductase (From Topology)H: Metallo-hydrolase/oxidoreductase (From Topology)T: Metallo-hydrolase/oxidoreductaseF: Lactamase_B_1ECOD (1.6)
BFlavodoxin_1e1ycfB2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavoproteins/Phosphotyrosine protein phosphatases-likeT: FlavoproteinsF: Flavodoxin_1ECOD (1.6)
CLactamase_B_1e1ycfC1 A: a+b four layersX: Metallo-hydrolase/oxidoreductase (From Topology)H: Metallo-hydrolase/oxidoreductase (From Topology)T: Metallo-hydrolase/oxidoreductaseF: Lactamase_B_1ECOD (1.6)
CFlavodoxin_1e1ycfC2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavoproteins/Phosphotyrosine protein phosphatases-likeT: FlavoproteinsF: Flavodoxin_1ECOD (1.6)
DLactamase_B_1e1ycfD1 A: a+b four layersX: Metallo-hydrolase/oxidoreductase (From Topology)H: Metallo-hydrolase/oxidoreductase (From Topology)T: Metallo-hydrolase/oxidoreductaseF: Lactamase_B_1ECOD (1.6)
DFlavodoxin_1e1ycfD2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavoproteins/Phosphotyrosine protein phosphatases-likeT: FlavoproteinsF: Flavodoxin_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF19583ODP family beta lactamase (ODP)ODP family beta lactamaseThe ODP (Oxygen-binding Di-iron Protein) domain is a distinct member of the metallo-beta-lactamase superfamily recruited to various bacterial and archaeal signal transduction pathways, including chemotaxis, to function as oxygen and iron sensors (1). ...The ODP (Oxygen-binding Di-iron Protein) domain is a distinct member of the metallo-beta-lactamase superfamily recruited to various bacterial and archaeal signal transduction pathways, including chemotaxis, to function as oxygen and iron sensors (1). ODP was shown to act as a sensor for chemotactic responses to both iron and oxygen in the human pathogen Treponema denticola (Td). The ODP di-iron site binds oxygen at high affinity to reversibly form an unusually stable peroxo adduct.
Domain
A, B, C, D
PF00258Flavodoxin (Flavodoxin_1)Flavodoxin- Domain

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
nitric-oxide reductase (FMN)  M-CSA #497

Moorella thermoacetica is a strictly anaerobic bacterium that utilises dissimilatory nitrate reduction for growth. It contains an A-type flavoprotein (FprA) that catalyses the reduction of nitric oxide to nitrogen dioxide, using FMN and a non-heme, non-sulphur diiron site.

Defined by 8 residues: HIS:A-24 [auth A-25]HIS:A-80 [auth A-81]GLU:A-82 [auth A-83]ASP:A-84 [auth A-85]HIS:A-147 [auth A-148]ASP:A-166 [auth A-167]TYR:A-194 [auth A-195]HIS:A-227 [auth A-228]
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Explore in 3DM-CSA Motif Definition
EC: 1 (PDB Primary Data)