1YAV | pdb_00001yav

Crystal structure of CBS domain-containing protein ykuL from Bacillus subtilis

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d1yavb3	Alpha and beta proteins (a+b)	CBS-domain pair	CBS-domain pair	CBS-domain pair	Hypothetical protein YkuL	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
A	d1yava3	Alpha and beta proteins (a+b)	CBS-domain pair	CBS-domain pair	CBS-domain pair	Hypothetical protein YkuL	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	CBS-domain pair	8032486	3000123	SCOP2B (2022-06-29)
A	SCOP2 Family	CBS-domain pair	8020106	4000247	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	CBS-domain pair	8032486	3000123	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e1yavB1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: Peptidase_C1	F:	ECOD (20:10:01)
A		e1yavA1	A: CBS-domain	X: CBS-domain	H: CBS-domain	T: CBS	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.10.580.10	Alpha Beta	Roll	CBS-domain	CBS-domain	CATH (4.3.0)
A	3.10.580.10	Alpha Beta	Roll	CBS-domain	CBS-domain	CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR051257	Diverse Function CBS-Domain-Containing Protein	Family
A, B	IPR046342	CBS domain superfamily	Homologous Superfamily
A, B	IPR048125	Cyclic-di-AMP-binding protein CbpB	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.