1Y6N
Crystal structure of Epstein-Barr virus IL-10 mutant (A87I) complexed with the soluble IL-10R1 chain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth L] | d1y6nl1 | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Interferons/interleukin-10 (IL-10) | Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) | Epstein-Barr virus (human gammaherpesvirus 4 ) [TaxId: 10376 ], | SCOPe (2.08) |
B [auth R] | d1y6nr1 | All beta proteins | Immunoglobulin-like beta-sandwich | Fibronectin type III | Fibronectin type III | Interleukin-10 receptor 1, IL-10R1 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth L] | SCOP2B Superfamily | 4-helical cytokines | 8037115 | 3001717 | SCOP2B (2022-06-29) |
B [auth R] | SCOP2B Superfamily | Fibronectin type III | 8055147 | 3002063 | SCOP2B (2022-06-29) |
B [auth R] | SCOP2B Superfamily | Fibronectin type III | 8055535 | 3002063 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth L] | IL10 | e1y6nL1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL10 | ECOD (1.6) |
B [auth R] | Interfer-bind | e1y6nR2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Interfer-bind | ECOD (1.6) |
B [auth R] | Tissue_fac | e1y6nR1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Tissue_fac | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth L] | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
B [auth R] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth L] | IPR020443 | Interleukin-10/19/20/22/24/26 family | Family |
A [auth L] | IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily |
A [auth L] | IPR050594 | Interleukin-10 family cytokines | Family |
A [auth L] | IPR000098 | Interleukin-10 | Family |
A [auth L] | IPR020423 | Interleukin-10, conserved site | Conserved Site |
B [auth R] | IPR003961 | Fibronectin type III | Domain |
B [auth R] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
B [auth R] | IPR050650 | Type II Cytokine and Tissue Factor Receptors | Family |
B [auth R] | IPR036116 | Fibronectin type III superfamily | Homologous Superfamily |