Annotations: 1Y2I

Crystal Structure of MCSG Target APC27401 from Shigella flexneri

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
E	d1y2ie1	Alpha and beta proteins (a+b)	Dodecin subunit-like	YbjQ-like	YbjQ-like	Hypothetical protein YbjQ	(Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ],	SCOPe (2.08)
E	d1y2ie2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ],	SCOPe (2.08)
D	d1y2id1	Alpha and beta proteins (a+b)	Dodecin subunit-like	YbjQ-like	YbjQ-like	Hypothetical protein YbjQ	(Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ],	SCOPe (2.08)
D	d1y2id2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ],	SCOPe (2.08)
C	d1y2ic1	Alpha and beta proteins (a+b)	Dodecin subunit-like	YbjQ-like	YbjQ-like	Hypothetical protein YbjQ	(Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ],	SCOPe (2.08)
C	d1y2ic2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ],	SCOPe (2.08)
B	d1y2ib1	Alpha and beta proteins (a+b)	Dodecin subunit-like	YbjQ-like	YbjQ-like	Hypothetical protein YbjQ	(Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ],	SCOPe (2.08)
B	d1y2ib2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ],	SCOPe (2.08)
A	d1y2ia1	Alpha and beta proteins (a+b)	Dodecin subunit-like	YbjQ-like	YbjQ-like	Hypothetical protein YbjQ	(Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ],	SCOPe (2.08)
A	d1y2ia2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E	SCOP2B Superfamily	YbjQ-like	8044272	3001160	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	YbjQ-like	8044272	3001160	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	YbjQ-like	8044272	3001160	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	YbjQ-like	8044272	3001160	SCOP2B (2022-06-29)
A	SCOP2 Family	YbjQ-like	8031894	4003633	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YbjQ-like	8044272	3001160	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E	HSP90	e1y2iE1	A: beta barrels	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: HSP90	ECOD (v294.2)
D	HSP90	e1y2iD1	A: beta barrels	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: HSP90	ECOD (v294.2)
C	HSP90	e1y2iC1	A: beta barrels	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: HSP90	ECOD (v294.2)
B	HSP90	e1y2iB1	A: beta barrels	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: HSP90	ECOD (v294.2)
A	YbjQ_1	e1y2iA1	A: a+b two layers	X: Dodecin subunit-like	H: YbjQ-like	T: YbjQ-like	F: YbjQ_1	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
E	3.30.110.70	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Hypothetical protein apc22750. Chain B	CATH (4.3.0)
D	3.30.110.70	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Hypothetical protein apc22750. Chain B	CATH (4.3.0)
C	3.30.110.70	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Hypothetical protein apc22750. Chain B	CATH (4.3.0)
B	3.30.110.70	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Hypothetical protein apc22750. Chain B	CATH (4.3.0)
A	3.30.110.70	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Hypothetical protein apc22750. Chain B	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF01906	Putative heavy-metal-binding (YbjQ_1)	Putative heavy-metal-binding	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR002765	Uncharacterised protein family UPF0145, YbjQ-like	Family
A, B, C, D, E	IPR035439	UPF0145 domain superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.