Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilySuperoxide reductase-like 8083452 3002044 SCOP2B (2022-06-29)
BSCOP2B SuperfamilySuperoxide reductase-like 8083452 3002044 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRubredoxin-like 8102717 3001257 SCOP2B (2022-06-29)
CSCOP2 FamilySuperoxide reductase-like 8083451 4007523 SCOP2 (2022-06-29)
CSCOP2 FamilyDesulforedoxin 8102716 4003684 SCOP2 (2022-06-29)
CSCOP2 SuperfamilySuperoxide reductase-like 8083452 3002044 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyRubredoxin-like 8102717 3001257 SCOP2 (2022-06-29)
DSCOP2B SuperfamilyRubredoxin-like 8102717 3001257 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySuperoxide reductase-like 8083452 3002044 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF01880e1y07A3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF01880ECOD (1.6)
APF22496e1y07A4 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: DesulforedoxinF: PF22496ECOD (1.6)
BPF01880e1y07B3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF01880ECOD (1.6)
BPF22496e1y07B4 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: DesulforedoxinF: PF22496ECOD (1.6)
CPF01880e1y07C3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF01880ECOD (1.6)
CPF22496e1y07C4 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: DesulforedoxinF: PF22496ECOD (1.6)
DPF01880e1y07D5 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF01880ECOD (1.6)
DPF22496e1y07D6 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: DesulforedoxinF: PF22496ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A6.20.90.10 Special Other non-globular SH3 type barrels. CATH (4.3.0)
A2.60.40.730 Mainly Beta Sandwich Immunoglobulin-like SOR catalytic domainCATH (4.3.0)
B6.20.90.10 Special Other non-globular SH3 type barrels. CATH (4.3.0)
B2.60.40.730 Mainly Beta Sandwich Immunoglobulin-like SOR catalytic domainCATH (4.3.0)
C6.20.90.10 Special Other non-globular SH3 type barrels. CATH (4.3.0)
C2.60.40.730 Mainly Beta Sandwich Immunoglobulin-like SOR catalytic domainCATH (4.3.0)
D6.20.90.10 Special Other non-globular SH3 type barrels. CATH (4.3.0)
D2.60.40.730 Mainly Beta Sandwich Immunoglobulin-like SOR catalytic domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF22496Class III superoxide reductase, N-terminal (SOR_N)Class III superoxide reductase, N-terminalThis short domain is found at the N-terminal end of class III superoxide reductase from Treponema pallidum (SOR, [swissprot:O83795]), a small protein that catalyse the one -electron reduction of superoxide to hydrogen peroxide, having rubredoxin as t ...This short domain is found at the N-terminal end of class III superoxide reductase from Treponema pallidum (SOR, [swissprot:O83795]), a small protein that catalyse the one -electron reduction of superoxide to hydrogen peroxide, having rubredoxin as their putative electron donor. It is organised into two distinct domains: an N-terminal (this entry) that shows four beta-strands and a C-terminal that harbours the catalytic site and displays an immunoglobulin-like fold [1].
Domain
A, B, C, D
PF01880Desulfoferrodoxin (Desulfoferrodox)DesulfoferrodoxinDesulfoferrodoxins contains two types of iron: an Fe-S4 site very similar to that found in desulforedoxin from Desulfovibrio gigas and an octahedral coordinated high-spin ferrous site most probably with nitrogen/oxygen-containing ligands. Due to this ...Desulfoferrodoxins contains two types of iron: an Fe-S4 site very similar to that found in desulforedoxin from Desulfovibrio gigas and an octahedral coordinated high-spin ferrous site most probably with nitrogen/oxygen-containing ligands. Due to this rather unusual combination of active centres, this novel protein is named desulfoferrodoxin [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage