1XSZ
The structure of RalF
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Sec7 domain-like | 8031771 | 4001318 | SCOP2 (2022-06-29) |
A | SCOP2 Family | RalF, C-terminal domain | 8031772 | 4003825 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Sec7 domain-like | 8044149 | 3001279 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | RalF, C-terminal domain | 8044150 | 3001576 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | RalF, C-terminal domain | 8044150 | 3001576 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Sec7 domain-like | 8044149 | 3001279 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Sec7 | e1xszA1 | A: alpha arrays | X: Sec7 domain (From Topology) | H: Sec7 domain (From Topology) | T: Sec7 domain | F: Sec7 | ECOD (1.6) |
A | EUF08414 | e1xszA2 | A: a+b two layers | X: TBP-like | H: RalF, C-terminal domain (From Topology) | T: RalF, C-terminal domain | F: EUF08414 | ECOD (1.6) |
B | Sec7 | e1xszB1 | A: alpha arrays | X: Sec7 domain (From Topology) | H: Sec7 domain (From Topology) | T: Sec7 domain | F: Sec7 | ECOD (1.6) |
B | EUF08414 | e1xszB2 | A: a+b two layers | X: TBP-like | H: RalF, C-terminal domain (From Topology) | T: RalF, C-terminal domain | F: EUF08414 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.220.20 | Mainly Alpha | Orthogonal Bundle | Annexin V | domain 1 | CATH (4.3.0) |
A | 1.10.1000.11 | Mainly Alpha | Orthogonal Bundle | Arf Nucleotide-binding Site Opener | domain 2 | CATH (4.3.0) |
A | 3.30.310.140 | Alpha Beta | 2-Layer Sandwich | TATA-Binding Protein | sec7 domains | CATH (4.3.0) |
B | 1.10.220.20 | Mainly Alpha | Orthogonal Bundle | Annexin V | domain 1 | CATH (4.3.0) |
B | 1.10.1000.11 | Mainly Alpha | Orthogonal Bundle | Arf Nucleotide-binding Site Opener | domain 2 | CATH (4.3.0) |
B | 3.30.310.140 | Alpha Beta | 2-Layer Sandwich | TATA-Binding Protein | sec7 domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18248 | RalF C-terminal Sec-7 capping domain (RalF_SCD) | RalF C-terminal Sec-7 capping domain | This is the C-terminal domain of RalF protein present in Legionella pneumophilia. RalF is secreted into host cytosol via the Dot/Icm type IV transporter where it acts to recruit ADP-ribosylation factor (Arf) to pathogen-containing phagosomes in the e ... | Domain | |
PF01369 | Sec7 domain (Sec7) | Sec7 domain | The Sec7 domain is a guanine-nucleotide-exchange-factor (GEF) for the Pfam:PF00025 family [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR023394 | Sec7, C-terminal domain superfamily | Homologous Superfamily | |
IPR040917 | RalF, C-terminal Sec-7 capping domain | Domain | |
IPR035999 | Sec7 domain superfamily | Homologous Superfamily | |
IPR000904 | Sec7 domain | Domain | |
IPR038075 | RalF, C-terminal domain superfamily | Homologous Superfamily |