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 1XOD | pdb_00001xod

Crystal structure of X. tropicalis Spred1 EVH-1 domain

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd1xodb2 All beta proteins PH domain-like barrel PH domain-like automated matches automated matches western clawed frog (Xenopus tropicalis ) [TaxId: 8364 ], SCOPe (2.08)
Bd1xodb3 Artifacts Tags Tags Tags N-terminal Tags western clawed frog (Xenopus tropicalis ) [TaxId: 8364 ], SCOPe (2.08)
Ad1xoda1 All beta proteins PH domain-like barrel PH domain-like Enabled/VASP homology 1 domain (EVH1 domain) Sprouty-related, EVH1 domain-containing protein 1, Spred-1 western clawed frog (Xenopus tropicalis ) [TaxId: 8364 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2 FamilyEnabled/VASP homology 1 domain (EVH1 domain) 8021464 4002440 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyPH domain-like 8033844 3000134 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyPH domain-like 8033844 3000134 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BRhve1xodB1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: RhvECOD (v295.2)
AWH1e1xodA1 A: beta barrelsX: PH domain-likeH: PH domain-likeT: PH domain-likeF: WH1ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (4.3.0)
A2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00568WH1 domain (WH1)WH1 domainWASp Homology domain 1 (WH1) domain. WASP is the protein that is defective in Wiskott-Aldrich syndrome (WAS). The majority of point mutations occur within the amino- terminal WH1 domain. The metabotropic glutamate receptors mGluR1alpha and mGluR5 bi ...WASp Homology domain 1 (WH1) domain. WASP is the protein that is defective in Wiskott-Aldrich syndrome (WAS). The majority of point mutations occur within the amino- terminal WH1 domain. The metabotropic glutamate receptors mGluR1alpha and mGluR5 bind a protein called homer, which is a WH1 domain homologue [2]. A subset of WH1 domains has been termed a "EVH1" domain [3] and appear to bind a polyproline motif.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Spred1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR007875SproutyFamily
A, B
IPR000697WH1/EVH1 domainDomain
A, B
IPR011993PH-like domain superfamilyHomologous Superfamily
A, B
IPR041937SPRE, EVH1 domainDomain
A, B
IPR023337c-Kit-binding domainDomain