1X49
Solution structure of the first DSRM domain in Interferon-induced, double-stranded RNA-activated protein kinase
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1x49a1 | Alpha and beta proteins (a+b) | dsRBD-like | dsRNA-binding domain-like | Double-stranded RNA-binding domain (dsRBD) | dsRNA-dependent protein kinase pkr | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d1x49a3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d1x49a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.160.20 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00035 | Double-stranded RNA binding motif (dsrm) | Double-stranded RNA binding motif | Sequences gathered for seed by HMM_iterative_training Putative motif shared by proteins that bind to dsRNA. At least some DSRM proteins seem to bind to specific RNA targets. Exemplified by Staufen, which is involved in localisation of at least five d ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017441 | Protein kinase, ATP binding site | Binding Site | |
IPR050339 | Cell Cycle and Stress Response Kinase | Family | |
IPR000719 | Protein kinase domain | Domain | |
IPR044453 | EIF2AK2, second double-stranded RNA binding domain | Domain | |
IPR044452 | EIF2AK2, first double-stranded RNA binding domain | Domain | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR014720 | Double-stranded RNA-binding domain | Domain | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site |