1X35

Recombinant T=3 capsid of a site specific mutant of SeMV CP

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyPositive stranded ssRNA viruses-like 8040784 3000918 SCOP2B (2021-05-27)
BSCOP2B SuperfamilyPositive stranded ssRNA viruses-like 8040784 3000918 SCOP2B (2021-05-27)
CSCOP2B SuperfamilyPositive stranded ssRNA viruses-like 8040784 3000918 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00729e1x35A1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00729ECOD (1.6)
BPF00729e1x35B1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00729ECOD (1.6)
CPF00729e1x35C1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00729ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF00729Viral coat protein (S domain) (Viral_coat)Viral coat protein (S domain)- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Coat protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR029053Viral coat protein subunitHomologous Superfamily
A, B, C
IPR000937Icosahedral viral capsid protein, S domainDomain