1WTD
Crystal structure of type II restrcition endonuclease, EcoO109I DNA-free form
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1wtda_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease EcoO109IR | Restriction endonuclease EcoO109IR | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d1wtdb_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease EcoO109IR | Restriction endonuclease EcoO109IR | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e1wtdA1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e1wtdB1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.3250.10 | Mainly Alpha | Orthogonal Bundle | type ii restriction endonuclease, domain 1 | type ii restriction endonuclease, domain 1 | CATH (4.3.0) |
A | 3.40.1560.10 | Alpha Beta | 3-Layer(aba) Sandwich | type ii restriction endonuclease, domain 2 | type ii restriction endonuclease, domain 2 | CATH (4.3.0) |
B | 1.10.3250.10 | Mainly Alpha | Orthogonal Bundle | type ii restriction endonuclease, domain 1 | type ii restriction endonuclease, domain 1 | CATH (4.3.0) |
B | 3.40.1560.10 | Alpha Beta | 3-Layer(aba) Sandwich | type ii restriction endonuclease, domain 2 | type ii restriction endonuclease, domain 2 | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011335 | Restriction endonuclease type II-like | Homologous Superfamily | |
IPR012297 | Restriction endonuclease EcoO109IR, catalytic domain superfamily | Homologous Superfamily |