1WJV

Solution structure of the N-terminal zinc finger domain of mouse cell growth regulating nucleolar protein LYAR


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1wjva1 Small proteins beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers C2HC finger Cell growth regulating nucleolar protein LyaR house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad1wjva4 Artifacts Tags Tags Tags C-terminal Tags house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad1wjva3 Artifacts Tags Tags Tags N-terminal Tags house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyC2HC finger 8031241 4003606 SCOP2 (2022-06-29)
ASCOP2 FamilyC2HC finger 8031242 4003606 SCOP2 (2022-06-29)
ASCOP2 Superfamilybeta-beta-alpha zinc fingers 8043619 3001077 SCOP2 (2022-06-29)
ASCOP2 Superfamilybeta-beta-alpha zinc fingers 8043620 3001077 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Azf-LYARe1wjvA2 A: few secondary structure elementsX: beta-beta-alpha zinc fingersH: beta-beta-alpha zinc fingers (From Topology)T: beta-beta-alpha zinc fingersF: zf-LYARECOD (1.6)
AKOG2186e1wjvA1 A: few secondary structure elementsX: beta-beta-alpha zinc fingersH: beta-beta-alpha zinc fingers (From Topology)T: beta-beta-alpha zinc fingersF: KOG2186ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.1490.490 Alpha Beta 2-Layer Sandwich Dna Ligase domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08790LYAR-type C2HC zinc finger (zf-LYAR)LYAR-type C2HC zinc fingerThis C2HC zinc finger is found in LYAR proteins such as Swiss:Q08288 which are involved in cell growth regulation.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Cell growth regulating nucleolar protein LYAR