1WIV
solution structure of RSGI RUH-023, a UBA domain from Arabidopsis cDNA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1wiva1 | All alpha proteins | RuvA C-terminal domain-like | UBA-like | UBA domain | Ubiquitin isopeptidase T | thale cress (Arabidopsis thaliana ) [TaxId: 3702 ], | SCOPe (2.08) |
A | d1wiva3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | thale cress (Arabidopsis thaliana ) [TaxId: 3702 ], | SCOPe (2.08) |
A | d1wiva2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | thale cress (Arabidopsis thaliana ) [TaxId: 3702 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.8.10 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22562 | UBA-like domain (UBA_7) | UBA-like domain | This entry represents a UBA domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR028889 | Ubiquitin specific protease domain | Domain | |
IPR016652 | Ubiquitinyl hydrolase | Family | |
IPR041432 | Ubiquitinyl hydrolase, variant UBP zinc finger | Domain | |
IPR001607 | Zinc finger, UBP-type | Domain | |
IPR018200 | Ubiquitin specific protease, conserved site | Conserved Site | |
IPR038765 | Papain-like cysteine peptidase superfamily | Homologous Superfamily | |
IPR050185 | Ubiquitin carboxyl-terminal hydrolase | Family | |
IPR015940 | Ubiquitin-associated domain | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR001394 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | Domain | |
IPR009060 | UBA-like superfamily | Homologous Superfamily |