1WG6 | pdb_00001wg6

Solution structure of PDZ domain in protein XP_110852

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1wg6a1	All beta proteins	PDZ domain-like	PDZ domain-like	PDZ domain	Partitioning-defective 3-like protein, PAR3-L (RIKEN cDNA 2810455b10)	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
A	d1wg6a3	Artifacts	Tags	Tags	Tags	C-terminal Tags	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
A	d1wg6a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	PDZ domain	8031128	4001790	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PDZ domain-like	8043506	3000388	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PDZ_6	e1wg6A1	A: beta barrels	X: PDZ domain	H: PDZ domain	T: PDZ domain	F: PDZ_6	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.42.10	Mainly Beta	Roll	Pdz3 Domain	PDZ domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00595	PDZ domain (PDZ)	PDZ domain	PDZ domains are found in diverse signaling proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	HYPOTHETICAL PROTEIN (RIKEN cDNA 2810455B10)	ion binding binding anion binding phosphatidylinositol binding small molecule binding	cell adhesion cellular process cell division cellular component organization organelle organization microtubule cytoskeleton organization microtubule-based process cellular component organization or biogenesis cytoskeleton organization establishment of cell polarity establishment or maintenance of cell polarity establishment of organelle localization localization cellular localization cell adhesion cellular process cell division cellular component organization organelle organization microtubule cytoskeleton organization microtubule-based process cellular component organization or biogenesis cytoskeleton organization establishment of cell polarity establishment or maintenance of cell polarity establishment of organelle localization localization cellular localization centrosome localization organelle localization establishment of localization in cell microtubule organizing center localization establishment of centrosome localization establishment of localization macromolecule localization intracellular protein localization establishment or maintenance of bipolar cell polarity establishment or maintenance of epithelial cell apical/basal polarity establishment or maintenance of apical/basal cell polarity	cellular anatomical structure endomembrane system cell-cell junction adherens junction anchoring junction cell junction cell periphery cell cortex intracellular anatomical structure cytoplasm apical part of cell membrane plasma membrane plasma membrane region cellular anatomical structure endomembrane system cell-cell junction adherens junction anchoring junction cell junction cell periphery cell cortex intracellular anatomical structure cytoplasm apical part of cell membrane plasma membrane plasma membrane region apical plasma membrane apical junction complex bicellular tight junction tight junction protein-containing complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR052213	Partitioning defective 3 homolog	Family
A	IPR036034	PDZ superfamily	Homologous Superfamily
A	IPR021922	Par3/HAL, N-terminal	Domain
A	IPR001478	PDZ domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.