1VRM

Crystal structure of the apbe protein (tm1553) from thermotoga maritima msb8 at 1.58 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1vrma1	Alpha and beta proteins (a+b)	T-fold	ApbE-like	ApbE-like	Hypothetical protein TM1553	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	ApbE-like	8020343	4003899	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	ApbE-like	8032723	3001754	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ApbE_C	e1vrmA2	A: a+b two layers	X: T-fold	H: ApbE-like (From Topology)	T: ApbE-like	F: ApbE_C	ECOD (1.6)
A	ApbE_N	e1vrmA1	A: a+b two layers	X: T-fold	H: ApbE-like (From Topology)	T: ApbE-like	F: ApbE_N	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.520.10	Alpha Beta	Roll	T-fold	ApbE-like domains	CATH (4.3.0)
A	1.10.3980.10	Mainly Alpha	Orthogonal Bundle	T-fold	ApbE-like superfamily	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF02424	ApbE family (ApbE)	ApbE family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	hypothetical protein TM1553	cation binding ion binding binding metal ion binding small molecule binding transferase activity catalytic activity	macromolecule modification protein flavinylation metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process protein modification process	cellular anatomical structure membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR003374	ApbE-like superfamily	Homologous Superfamily
A	IPR024932	Flavin transferase ApbE	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.