1VKA
Southeast Collaboratory for Structural Genomics: Hypothetical Human Protein Q15691 N-Terminal Fragment
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1vkaa1 | All alpha proteins | CH domain-like | Calponin-homology domain, CH-domain | Calponin-homology domain, CH-domain | Microtubule-associated protein eb1, N-terminal microtubule binding domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d1vkaa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d1vkab_ | All alpha proteins | CH domain-like | Calponin-homology domain, CH-domain | Calponin-homology domain, CH-domain | Microtubule-associated protein eb1, N-terminal microtubule binding domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00307 | e1vkaA1 | A: alpha bundles | X: CH domain-like | H: Calponin-homology domain-like (From Topology) | T: Calponin-homology domain-like | F: PF00307 | ECOD (1.6) |
B | PF00307 | e1vkaB1 | A: alpha bundles | X: CH domain-like | H: Calponin-homology domain-like (From Topology) | T: Calponin-homology domain-like | F: PF00307 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.418.10 | Mainly Alpha | Orthogonal Bundle | Actin-binding Protein, T-fimbrin | domain 1 | CATH (4.3.0) |
B | 1.10.418.10 | Mainly Alpha | Orthogonal Bundle | Actin-binding Protein, T-fimbrin | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00307 | Calponin homology (CH) domain (CH) | Calponin homology (CH) domain | The CH domain is found in both cytoskeletal proteins and signal transduction proteins [1]. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its ac ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001715 | Calponin homology domain | Domain | |
IPR004953 | EB1, C-terminal | Domain | |
IPR027328 | Microtubule-associated protein RP/EB | Family | |
IPR036133 | EB1, C-terminal domain superfamily | Homologous Superfamily | |
IPR036872 | CH domain superfamily | Homologous Superfamily |