Annotations: 1VCV

Structure of 2-deoxyribose-5-phosphate aldolase from Pyrobaculum aerophilum

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d1vcvb_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	automated matches	(Pyrobaculum aerophilum ) [TaxId: 13773 ],	SCOPe (2.08)
A	d1vcva1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Deoxyribose-phosphate aldolase DeoC	(Pyrobaculum aerophilum ) [TaxId: 13773 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Aldolase	8033160	3000445	SCOP2B (2022-06-29)
A	SCOP2 Family	Class I aldolase	8020780	4003216	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Aldolase	8033160	3000445	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	XylA2_C	e1vcvB1	A: alpha arrays	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: C-terminal subdomain in Lon-related proteases catalytic domains	F: XylA2_C	ECOD (v295.2)
A	DeoC	e1vcvA1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: DeoC	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
A	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Probable deoxyribose-phosphate aldolase	deoxyribose-phosphate aldolase activity lyase activity catalytic activity carbon-carbon lyase activity aldehyde-lyase activity	carbohydrate derivative catabolic process catabolic process organophosphate metabolic process 2-deoxyribose 1-phosphate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process metabolic process cellular process deoxyribose phosphate catabolic process phosphorus metabolic process carbohydrate metabolic process carbohydrate catabolic process primary metabolic process deoxyribonucleotide catabolic process carbohydrate derivative catabolic process catabolic process organophosphate metabolic process 2-deoxyribose 1-phosphate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process metabolic process cellular process deoxyribose phosphate catabolic process phosphorus metabolic process carbohydrate metabolic process carbohydrate catabolic process primary metabolic process deoxyribonucleotide catabolic process deoxyribonucleotide metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR011343	Deoxyribose-phosphate aldolase	Family
A, B	IPR002915	DeoC/FbaB/LacD aldolase	Family
A, B	IPR028581	Deoxyribose-phosphate aldolase type I	Family
A, B	IPR013785	Aldolase-type TIM barrel	Homologous Superfamily

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