1V1I
Adenovirus fibre shaft sequence N-terminally fused to the bacteriophage T4 fibritin foldon trimerisation motif with a long linker
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | T4 fibritin foldon | 8091029 | 3002478 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Fibre shaft of virus attachment proteins | 8041108 | 3001872 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | T4 fibritin foldon | 8091029 | 3002478 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Fibre shaft of virus attachment proteins | 8041108 | 3001872 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | T4 fibritin foldon | 8091029 | 3002478 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Fibre shaft of virus attachment proteins | 8041108 | 3001872 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF07860 | e1v1iA1 | A: beta duplicates or obligate multimers | X: Triple beta-spiral (From Topology) | H: Triple beta-spiral (From Topology) | T: Triple beta-spiral | F: EUF07860 | ECOD (1.6) |
A | UNK_F_TYPE | e1v1iA2 | A: a+b duplicates or obligate multimers | X: MPER trimer (From Topology) | H: MPER trimer (From Topology) | T: MPER trimer | F: UNK_F_TYPE | ECOD (1.6) |
C | EUF07860 | e1v1iC1 | A: beta duplicates or obligate multimers | X: Triple beta-spiral (From Topology) | H: Triple beta-spiral (From Topology) | T: Triple beta-spiral | F: EUF07860 | ECOD (1.6) |
C | UNK_F_TYPE | e1v1iC2 | A: a+b duplicates or obligate multimers | X: MPER trimer (From Topology) | H: MPER trimer (From Topology) | T: MPER trimer | F: UNK_F_TYPE | ECOD (1.6) |
B | EUF07860 | e1v1iB1 | A: beta duplicates or obligate multimers | X: Triple beta-spiral (From Topology) | H: Triple beta-spiral (From Topology) | T: Triple beta-spiral | F: EUF07860 | ECOD (1.6) |
B | UNK_F_TYPE | e1v1iB2 | A: a+b duplicates or obligate multimers | X: MPER trimer (From Topology) | H: MPER trimer (From Topology) | T: MPER trimer | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.25.20 | Mainly Beta | Ribbon | Laminin | reovirus attachment protein sigma1 | CATH (4.3.0) |
A | 6.20.230.10 | Special | Other non-globular | Wheat Germ Agglutinin (Isolectin 2) | domain 1 | CATH (4.3.0) |
C | 2.10.25.20 | Mainly Beta | Ribbon | Laminin | reovirus attachment protein sigma1 | CATH (4.3.0) |
C | 6.20.230.10 | Special | Other non-globular | Wheat Germ Agglutinin (Isolectin 2) | domain 1 | CATH (4.3.0) |
B | 2.10.25.20 | Mainly Beta | Ribbon | Laminin | reovirus attachment protein sigma1 | CATH (4.3.0) |
B | 6.20.230.10 | Special | Other non-globular | Wheat Germ Agglutinin (Isolectin 2) | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00608 | Adenoviral fibre protein (repeat/shaft region) (Adeno_shaft) | Adenoviral fibre protein (repeat/shaft region) | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012473 | Fibritin C-terminal | Domain | |
IPR009013 | Attachment protein shaft domain superfamily | Homologous Superfamily | |
IPR000978 | Adenoviral fibre protein, knob | Domain | |
IPR008982 | Adenovirus pIV-like, attachment domain | Homologous Superfamily | |
IPR000931 | Adenovirus fibre protein | Family | |
IPR000939 | Adenoviral fibre protein, repeat/shaft region | Repeat |