1UZJ
Integrin binding cbEGF22-TB4-cbEGF33 fragment of human fibrillin-1, holo form.
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | EGF/Laminin-like | 8035328 | 3000412 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | EGF/Laminin-like | 8035330 | 3000412 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | TB module/8-cys domain | 8035332 | 3000962 | SCOP2B (2022-06-29) |
A | SCOP2 Family | EGF-type module | 8022948 | 4003198 | SCOP2 (2022-06-29) |
A | SCOP2 Family | EGF-type module | 8022950 | 4003198 | SCOP2 (2022-06-29) |
A | SCOP2 Family | TB module/8-cys domain | 8022952 | 4003506 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | EGF/Laminin-like | 8035328 | 3000412 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | EGF/Laminin-like | 8035330 | 3000412 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | TB module/8-cys domain | 8035332 | 3000962 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | EGF/Laminin-like | 8035330 | 3000412 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | EGF/Laminin-like | 8035328 | 3000412 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | TB module/8-cys domain | 8035332 | 3000962 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | TB | e1uzjB1 | A: few secondary structure elements | X: TB module/8-cys domain (From Topology) | H: TB module/8-cys domain (From Topology) | T: TB module/8-cys domain | F: TB | ECOD (1.6) |
B | EGF_CA | e1uzjB2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: EGF_CA | ECOD (1.6) |
A | TB | e1uzjA1 | A: few secondary structure elements | X: TB module/8-cys domain (From Topology) | H: TB module/8-cys domain (From Topology) | T: TB module/8-cys domain | F: TB | ECOD (1.6) |
A | EGF_CA | e1uzjA2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: EGF_CA | ECOD (1.6) |
C | TB | e1uzjC1 | A: few secondary structure elements | X: TB module/8-cys domain (From Topology) | H: TB module/8-cys domain (From Topology) | T: TB module/8-cys domain | F: TB | ECOD (1.6) |
C | EGF_CA | e1uzjC2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: EGF_CA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
B | 3.90.290.10 | Alpha Beta | Alpha-Beta Complex | Extracellular Matrix Fibrillin | TGF-beta binding (TB) domain | CATH (4.3.0) |
A | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
A | 3.90.290.10 | Alpha Beta | Alpha-Beta Complex | Extracellular Matrix Fibrillin | TGF-beta binding (TB) domain | CATH (4.3.0) |
C | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
C | 3.90.290.10 | Alpha Beta | Alpha-Beta Complex | Extracellular Matrix Fibrillin | TGF-beta binding (TB) domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07645 | Calcium-binding EGF domain (EGF_CA) | Calcium-binding EGF domain | - | Domain | |
PF00683 | TB domain (TB) | TB domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR024731 | EGF domain | Domain | |
IPR018097 | EGF-like calcium-binding, conserved site | Conserved Site | |
IPR026823 | Complement Clr-like EGF domain | Domain | |
IPR013032 | EGF-like, conserved site | Conserved Site | |
IPR000742 | EGF-like domain | Domain | |
IPR049883 | NOTCH1 EGF-like calcium-binding domain | Domain | |
IPR052080 | von Willebrand factor C/EGF & Fibrillin | Family | |
IPR036773 | TGF-beta binding (TB) domain superfamily | Homologous Superfamily | |
IPR049388 | Fibrillin, first EGF domain | Domain | |
IPR009030 | Growth factor receptor cysteine-rich domain superfamily | Homologous Superfamily | |
IPR001881 | EGF-like calcium-binding domain | Domain | |
IPR017878 | TB domain | Domain | |
IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PTM | |
IPR040872 | Fibrillin 1, unique N-terminal domain | Domain |