1UIT

Solution structure of RSGI RUH-006, The third PDZ domain OF hDlg5 (KIAA0583) protein [Homo sapiens]

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1uita1	All beta proteins	PDZ domain-like	PDZ domain-like	PDZ domain	Discs large 5 protein KIAA0583	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d1uita3	Artifacts	Tags	Tags	Tags	C-terminal Tags	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d1uita2	Artifacts	Tags	Tags	Tags	N-terminal Tags	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	PDZ domain	8029443	4001790	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PDZ domain-like	8041822	3000388	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00595	e1uitA1	A: beta barrels	X: PDZ domain (From Topology)	H: PDZ domain (From Topology)	T: PDZ domain	F: PF00595	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.42.10	Mainly Beta	Roll	Pdz3 Domain	PDZ domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF16610	Unstructured region between two PDZ domains on Dlg5 (dbPDZ_assoc)	Unstructured region between two PDZ domains on Dlg5	-	Disordered
A	PF00595	PDZ domain (PDZ)	PDZ domain	PDZ domains are found in diverse signaling proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	HUMAN DISCS LARGE 5 PROTEIN	cytoskeletal protein binding protein binding binding beta-catenin binding signaling receptor complex adaptor activity protein-macromolecule adaptor activity molecular adaptor activity signaling adaptor activity	developmental process multicellular organismal process head development animal organ development brain development nervous system development multicellular organism development central nervous system development midbrain development anatomical structure development system development cellular component organization cellular component biogenesis cellular component assembly developmental process multicellular organismal process head development animal organ development brain development nervous system development multicellular organism development central nervous system development midbrain development anatomical structure development system development cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis protein localization localization cellular localization apical protein localization cellular macromolecule localization macromolecule localization positive regulation of nervous system development positive regulation of cellular component organization regulation of cellular process regulation of cellular component organization regulation of developmental process positive regulation of biological process regulation of nervous system development positive regulation of developmental process cell junction assembly regulation of multicellular organismal process regulation of synapse structure or activity synapse organization regulation of synapse assembly regulation of biological quality positive regulation of cellular process regulation of multicellular organismal development regulation of biological process positive regulation of cellular component biogenesis biological regulation regulation of cellular component biogenesis regulation of cell junction assembly positive regulation of cell junction assembly regulation of synapse organization cell junction organization positive regulation of multicellular organismal process synapse assembly positive regulation of synapse assembly adherens junction organization adherens junction assembly apical junction assembly zonula adherens assembly cell-cell junction assembly cell-cell junction organization polarized epithelial cell differentiation epithelium development cellular developmental process morphogenesis of an epithelium tissue development epithelial cell differentiation tissue morphogenesis anatomical structure morphogenesis morphogenesis of a polarized epithelium cell differentiation branching morphogenesis of an epithelial tube respiratory tube development tube morphogenesis lung morphogenesis lung development respiratory system development animal organ morphogenesis epithelial tube morphogenesis tube development morphogenesis of a branching structure epithelial tube branching involved in lung morphogenesis morphogenesis of a branching epithelium cellular response to stimulus positive regulation of cell communication positive regulation of signal transduction response to stimulus signaling regulation of signal transduction cell communication positive regulation of response to stimulus positive regulation of smoothened signaling pathway signal transduction regulation of smoothened signaling pathway regulation of signaling cell surface receptor signaling pathway smoothened signaling pathway regulation of response to stimulus regulation of cell communication positive regulation of signaling negative regulation of lymphocyte proliferation regulation of leukocyte activation negative regulation of biological process regulation of cell activation negative regulation of T cell proliferation negative regulation of cell adhesion negative regulation of leukocyte proliferation T cell activation lymphocyte proliferation regulation of immune system process regulation of leukocyte proliferation cell population proliferation negative regulation of T cell activation negative regulation of leukocyte cell-cell adhesion regulation of cell population proliferation mononuclear cell proliferation negative regulation of cell-cell adhesion regulation of leukocyte cell-cell adhesion negative regulation of multicellular organismal process negative regulation of leukocyte activation lymphocyte activation negative regulation of lymphocyte activation leukocyte proliferation leukocyte cell-cell adhesion leukocyte activation negative regulation of mononuclear cell proliferation cell adhesion cell-cell adhesion negative regulation of cellular process regulation of cell-cell adhesion T cell proliferation regulation of lymphocyte proliferation negative regulation of cell population proliferation regulation of cell adhesion cell activation regulation of T cell activation negative regulation of cell activation regulation of T cell proliferation negative regulation of immune system process immune system process regulation of mononuclear cell proliferation regulation of lymphocyte activation regulation of apoptotic process apoptotic process regulation of programmed cell death cell death programmed cell death cell projection organization positive regulation of dendritic spine development cell development regulation of dendritic spine development neuron projection development neurogenesis neuron differentiation dendrite development dendritic spine development plasma membrane bounded cell projection organization generation of neurons neuron development postsynapse organization hippo signaling intracellular signal transduction regulation of intracellular signal transduction positive regulation of intracellular signal transduction positive regulation of hippo signaling regulation of hippo signaling renal system development metanephros development collecting duct development metanephric collecting duct development kidney development negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of cell communication negative regulation of response to stimulus negative regulation of hippo signaling negative regulation of signal transduction mesenchyme development mesenchymal cell differentiation epithelial to mesenchymal transition maintenance of cell polarity establishment or maintenance of cell polarity negative regulation of locomotion regulation of cell motility regulation of locomotion regulation of cell migration negative regulation of cell motility cell migration cell motility negative regulation of cell migration locomotion protein localization to cell junction protein localization to adherens junction protein localization to cell-cell junction neuroepithelial cell differentiation columnar/cuboidal epithelial cell differentiation establishment or maintenance of bipolar cell polarity establishment or maintenance of epithelial cell apical/basal polarity establishment or maintenance of apical/basal cell polarity	cell junction cellular anatomical entity cell periphery plasma membrane membrane intracellular anatomical structure cytoplasm synapse glutamatergic synapse cell-cell junction adherens junction anchoring junction postsynaptic density postsynapse cell junction cellular anatomical entity cell periphery plasma membrane membrane intracellular anatomical structure cytoplasm synapse glutamatergic synapse cell-cell junction adherens junction anchoring junction postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization organelle asymmetric synapse membrane-bounded organelle cilium plasma membrane bounded cell projection intracellular organelle ciliary basal body cell projection microtubule organizing center cytoskeleton intracellular non-membrane-bounded organelle microtubule cytoskeleton non-membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR008145	Guanylate kinase/L-type calcium channel beta subunit	Domain
A	IPR035537	Disks large homologue 5, SH3 domain	Domain
A	IPR036028	SH3-like domain superfamily	Homologous Superfamily
A	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A	IPR011029	Death-like domain superfamily	Homologous Superfamily
A	IPR036034	PDZ superfamily	Homologous Superfamily
A	IPR001452	SH3 domain	Domain
A	IPR001315	CARD domain	Domain
A	IPR006907	Disks large homolog 5, N-terminal	Domain
A	IPR008144	Guanylate kinase-like domain	Domain
A	IPR001478	PDZ domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q8TDM6	tuberculosis amyotrophic lateral sclerosis cutaneous lupus erythematosus interstitial cystitis myopathy oligodendroglioma pancreatic ductal adenocarcinoma pituitary cancer astrocytic tumor dermatomyositis lung cancer non-alcoholic fatty liver disease osteosarcoma pancreatic intraductal papillary-mucinous neoplasm spina bifida tuberculosis amyotrophic lateral sclerosis cutaneous lupus erythematosus interstitial cystitis myopathy oligodendroglioma pancreatic ductal adenocarcinoma pituitary cancer astrocytic tumor dermatomyositis lung cancer non-alcoholic fatty liver disease osteosarcoma pancreatic intraductal papillary-mucinous neoplasm spina bifida breast carcinoma inflammatory bowel disease 5 medulloblastoma non-small cell lung carcinoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.