The structure of Halothiobacillus neapolitanus RuBisCo
External Resource: Annotation
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
A | d1svda1 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | RuBisCo, C-terminal domain | RuBisCo, large subunit, C-terminal domain | Ribulose 1,5-bisphosphate carboxylase-oxygenase | (Halothiobacillus neapolitanus ) [TaxId: 927 ], | SCOPe (2.08) |
A | d1svda2 | Alpha and beta proteins (a+b) | Ferredoxin-like | RuBisCO, large subunit, small (N-terminal) domain | Ribulose 1,5-bisphosphate carboxylase-oxygenase | Ribulose 1,5-bisphosphate carboxylase-oxygenase | (Halothiobacillus neapolitanus ) [TaxId: 927 ], | SCOPe (2.08) |
B [auth M] | d1svdm1 | Alpha and beta proteins (a+b) | RuBisCO, small subunit | RuBisCO, small subunit | RuBisCO, small subunit | Ribulose 1,5-bisphosphate carboxylase-oxygenase | (Halothiobacillus neapolitanus ) [TaxId: 927 ], | SCOPe (2.08) |
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2 Family | RuBisCo, large subunit, C-terminal domain | 8020018 | 4003287 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Ribulose 1, 5-bisphosphate carboxylase-oxygenase | 8020019 | 4001311 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | RuBisCo, C-terminal domain | 8032398 | 3000552 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | RuBisCO, large subunit, small (N-terminal) domain | 8032399 | 3001258 | SCOP2 (2022-06-29) |
B [auth M] | SCOP2 Family | RuBisCO, small subunit | 8020022 | 4001455 | SCOP2 (2022-06-29) |
B [auth M] | SCOP2 Superfamily | RuBisCO, small subunit | 8032402 | 3001622 | SCOP2 (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF02788 | e1svdA1 | A: a+b two layers | X: Alpha-beta plaits | H: RuBisCO, large subunit, small (N-terminal) domain (From Topology) | T: RuBisCO, large subunit, small (N-terminal) domain | F: PF02788 | ECOD (1.6) |
A | PF00016 | e1svdA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00016 | ECOD (1.6) |
B [auth M] | PF00101 | e1svdM1 | A: a+b two layers | X: Reverse ferredoxin | H: RuBisCO, small subunit (From Topology) | T: RuBisCO, small subunit | F: PF00101 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|
| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | | | |
B [auth M] | Ribulose bisphosphate carboxylase small chain | | | |
Chains | Accession | Name | Type |
---|
| IPR020888 | Ribulose bisphosphate carboxylase large subunit, type I | Family |
| IPR036376 | Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily | Homologous Superfamily |
| IPR020878 | Ribulose bisphosphate carboxylase, large chain, active site | Active Site |
| IPR000685 | Ribulose bisphosphate carboxylase, large subunit, C-terminal | Domain |
| IPR033966 | RuBisCO | Family |
| IPR036422 | RuBisCO large subunit, N-terminal domain superfamily | Homologous Superfamily |
| IPR017443 | Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal | Domain |
B [auth M] | IPR036385 | Ribulose bisphosphate carboxylase, small subunit superfamily | Homologous Superfamily |
B [auth M] | IPR024681 | Ribulose bisphosphate carboxylase, small subunit | Family |
B [auth M] | IPR000894 | Ribulose bisphosphate carboxylase small subunit, domain | Domain |