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1S1N
SH3 domain of human nephrocystin
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Domain Annotation: SCOP/SCOPe Classification
SCOP-e Database Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
Provenance Source (Version)
A
d1s1na_
All beta proteins
SH3-like barrel
SH3-domain
automated matches
automated matches
human
(
Homo sapiens
) [TaxId:
9606
],
SCOPe (2.08)
Domain Annotation: SCOP2 Classification
SCOP2 Database Homepage
Chains
Type
Family Name
Domain Identifier
Family Identifier
Provenance Source (Version)
A
SCOP2 Family
SH3-domain
8065156
4000369
SCOP2 (2022-06-29)
A
SCOP2 Superfamily
SH3-domain
8065157
3000153
SCOP2 (2022-06-29)
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
SH3_1
e1s1nA1
A: beta barrels
X: SH3
H: SH3
T: SH3
F: SH3_1
ECOD (1.6)
Domain Annotation: CATH
CATH Database Homepage
Chain
Domain
Class
Architecture
Topology
Homology
Provenance Source (Version)
A
2.30.30.40
Mainly Beta
Roll
SH3 type barrels.
SH3 Domains
CATH (4.3.0)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF00018
SH3 domain (SH3_1)
SH3 domain
SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase Swiss:P12931. The structure is a partly opened beta barrel.
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
Nephrocystin 1
structural molecule activity
developmental process
protein localization
establishment of planar polarity
epithelium development
cellular localization
morphogenesis of an epithelium
tissue development
anatomical structure morphogenesis
tissue morphogenesis
localization
establishment of tissue polarity
morphogenesis of a polarized epithelium
cellular macromolecule localization
macromolecule localization
anatomical structure development
developmental process
protein localization
establishment of planar polarity
epithelium development
cellular localization
morphogenesis of an epithelium
tissue development
anatomical structure morphogenesis
tissue morphogenesis
localization
establishment of tissue polarity
morphogenesis of a polarized epithelium
cellular macromolecule localization
macromolecule localization
anatomical structure development
protein localization involved in establishment of planar polarity
cellular process
multicellular organismal process
sensory organ development
eye development
animal organ development
retina development in camera-type eye
visual system development
multicellular organism development
camera-type eye development
sensory system development
system development
cell adhesion
cell-cell adhesion
response to light stimulus
behavior
response to stimulus
visual behavior
response to radiation
response to abiotic stimulus
spermatid differentiation
spermatogenesis
sexual reproduction
cellular developmental process
reproductive process
multicellular organismal reproductive process
cellular process involved in reproduction in multicellular organism
developmental process involved in reproduction
male gamete generation
gamete generation
cell differentiation
cellular component organization
organelle organization
actin cytoskeleton organization
actin filament-based process
cellular component organization or biogenesis
cytoskeleton organization
bicellular tight junction assembly
positive regulation of cellular component organization
regulation of cellular process
regulation of cellular component organization
positive regulation of biological process
tight junction organization
cellular component biogenesis
cellular component assembly
cell junction assembly
positive regulation of cellular process
cell-cell junction assembly
cell-cell junction organization
regulation of biological process
regulation of bicellular tight junction assembly
positive regulation of cellular component biogenesis
biological regulation
regulation of cellular component biogenesis
apical junction assembly
regulation of cell junction assembly
positive regulation of cell junction assembly
positive regulation of bicellular tight junction assembly
cell junction organization
tight junction assembly
cellular response to stimulus
signaling
signal transduction
cell communication
cell projection organization
Less
cell-cell junction
adherens junction
anchoring junction
cell junction
cellular anatomical entity
membrane-bounded organelle
cell projection
organelle
cilium
plasma membrane bounded cell projection
membrane
intracellular organelle
intracellular anatomical structure
cytoskeleton
cell-cell junction
adherens junction
anchoring junction
cell junction
cellular anatomical entity
membrane-bounded organelle
cell projection
organelle
cilium
plasma membrane bounded cell projection
membrane
intracellular organelle
intracellular anatomical structure
cytoskeleton
intracellular non-membrane-bounded organelle
non-membrane-bounded organelle
ciliary transition zone
non-motile cilium
9+0 non-motile cilium
neuron projection
photoreceptor cell cilium
photoreceptor connecting cilium
cytoplasm
cytosol
apical junction complex
bicellular tight junction
tight junction
motile cilium
Less
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR001452
SH3 domain
Domain
A
IPR036028
SH3-like domain superfamily
Homologous Superfamily
A
IPR030642
Nephrocystin-1, SH3 domain
Domain
A
IPR039687
Nephrocystin-1
Family
Pharos: Disease Associations
Pharos Homepage Annotation
Chains
Drug Target  
Associated Disease
A
Pharos
: 
O15259
Senior-Loken syndrome
nephronophthisis 1
nephronophthisis
Bardet-Biedl syndrome
Joubert syndrome with renal defect
kidney disease
Senior-Loken syndrome 1
Joubert syndrome
Renal dysplasia and retinal aplasia (disorder)
atypical teratoid rhabdoid tumor
glioblastoma
Leber congenital amaurosis
Crohn disease
intellectual disability
malignant ependymoma
Senior-Loken syndrome
nephronophthisis 1
nephronophthisis
Bardet-Biedl syndrome
Joubert syndrome with renal defect
kidney disease
Senior-Loken syndrome 1
Joubert syndrome
Renal dysplasia and retinal aplasia (disorder)
atypical teratoid rhabdoid tumor
glioblastoma
Leber congenital amaurosis
Crohn disease
intellectual disability
malignant ependymoma
cholestasis
ciliopathy
malignant glioma
Less
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