1RLD
SOLID-STATE PHASE TRANSITION IN THE CRYSTAL STRUCTURE OF RIBULOSE 1,5-BIPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | RuBisCO, large subunit, small (N-terminal) domain | 8035389 | 3001258 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | RuBisCo, C-terminal domain | 8043670 | 3000552 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | RuBisCo, C-terminal domain | 8043670 | 3000552 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | RuBisCO, large subunit, small (N-terminal) domain | 8035389 | 3001258 | SCOP2B (2022-06-29) |
B [auth S] | SCOP2B Superfamily | RuBisCO, small subunit | 8035797 | 3001622 | SCOP2B (2022-06-29) |
D [auth T] | SCOP2B Superfamily | RuBisCO, small subunit | 8035797 | 3001622 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02788 | e1rldA1 | A: a+b two layers | X: Alpha-beta plaits | H: RuBisCO, large subunit, small (N-terminal) domain (From Topology) | T: RuBisCO, large subunit, small (N-terminal) domain | F: PF02788 | ECOD (1.6) |
A | PF00016 | e1rldA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00016 | ECOD (1.6) |
C [auth B] | PF02788 | e1rldB1 | A: a+b two layers | X: Alpha-beta plaits | H: RuBisCO, large subunit, small (N-terminal) domain (From Topology) | T: RuBisCO, large subunit, small (N-terminal) domain | F: PF02788 | ECOD (1.6) |
C [auth B] | PF00016 | e1rldB2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00016 | ECOD (1.6) |
B [auth S] | PF00101 | e1rldS1 | A: a+b two layers | X: Reverse ferredoxin | H: RuBisCO, small subunit (From Topology) | T: RuBisCO, small subunit | F: PF00101 | ECOD (1.6) |
D [auth T] | PF00101 | e1rldT1 | A: a+b two layers | X: Reverse ferredoxin | H: RuBisCO, small subunit (From Topology) | T: RuBisCO, small subunit | F: PF00101 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.150 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RuBisCO large subunit, N-terminal domain | CATH (4.3.0) |
A | 3.20.20.110 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | CATH (4.3.0) |
C [auth B] | 3.30.70.150 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RuBisCO large subunit, N-terminal domain | CATH (4.3.0) |
C [auth B] | 3.20.20.110 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | CATH (4.3.0) |
B [auth S] | 3.30.190.10 | Alpha Beta | 2-Layer Sandwich | Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase | Ribulose bisphosphate carboxylase, small subunit | CATH (4.3.0) |
D [auth T] | 3.30.190.10 | Alpha Beta | 2-Layer Sandwich | Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase | Ribulose bisphosphate carboxylase, small subunit | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF02788 | Ribulose bisphosphate carboxylase large chain, N-terminal domain (RuBisCO_large_N) | Ribulose bisphosphate carboxylase large chain, N-terminal domain | The N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold. | Domain |
A, C [auth B] | PF00016 | Ribulose bisphosphate carboxylase large chain, catalytic domain (RuBisCO_large) | Ribulose bisphosphate carboxylase large chain, catalytic domain | The C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold. | Domain |
B [auth S], D [auth T] | PF00101 | Ribulose bisphosphate carboxylase, small chain (RuBisCO_small) | Ribulose bisphosphate carboxylase, small chain | - | Domain |