1R6Q
ClpNS with fragments
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1r6qa_ | All alpha proteins | Double Clp-N motif | Double Clp-N motif | Double Clp-N motif | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d1r6qb_ | All alpha proteins | Double Clp-N motif | Double Clp-N motif | Double Clp-N motif | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
C | d1r6qc_ | Alpha and beta proteins (a+b) | ClpS-like | ClpS-like | Adaptor protein ClpS (YljA) | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
D | d1r6qd_ | Alpha and beta proteins (a+b) | ClpS-like | ClpS-like | Adaptor protein ClpS (YljA) | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Double Clp-N motif | 8042716 | 3001383 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Double Clp-N motif | 8042716 | 3001383 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ClpS-like | 8032304 | 3000936 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | ClpS-like | 8032304 | 3000936 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02861 | e1r6qA1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: PF02861 | ECOD (1.6) |
B | PF02861 | e1r6qB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: PF02861 | ECOD (1.6) |
C | PF02617 | e1r6qC1 | A: a+b two layers | X: ClpS-like | H: ClpS-related (From Topology) | T: ClpS-related | F: PF02617 | ECOD (1.6) |
D | PF02617 | e1r6qD1 | A: a+b two layers | X: ClpS-like | H: ClpS-related (From Topology) | T: ClpS-related | F: PF02617 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.1780.10 | Mainly Alpha | Orthogonal Bundle | Double Clp-N motif | Clp, N-terminal domain | CATH (4.3.0) |
B | 1.10.1780.10 | Mainly Alpha | Orthogonal Bundle | Double Clp-N motif | Clp, N-terminal domain | CATH (4.3.0) |
C | 3.30.1390.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein L30 | Chain: A, | CATH (4.3.0) |
D | 3.30.1390.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein L30 | Chain: A, | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02861 | Clp amino terminal domain, pathogenicity island component (Clp_N) | Clp amino terminal domain, pathogenicity island component | - | Family | |
PF02617 | ATP-dependent Clp protease adaptor protein ClpS (ClpS) | ATP-dependent Clp protease adaptor protein ClpS | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001270 | ClpA/B family | Family | |
IPR018368 | ClpA/B, conserved site 1 | Conserved Site | |
IPR041546 | ClpA/ClpB, AAA lid domain | Domain | |
IPR050130 | ATP-dependent Clp protease/Chaperone ClpA/ClpB | Family | |
IPR004176 | Clp, repeat (R) domain | Domain | |
IPR028299 | ClpA/B, conserved site 2 | Conserved Site | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR003959 | ATPase, AAA-type, core | Domain | |
IPR013461 | ATP-dependent Clp protease ATP-binding subunit ClpA | Family | |
IPR019489 | Clp ATPase, C-terminal | Domain | |
IPR036628 | Clp, N-terminal domain superfamily | Homologous Superfamily | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR003769 | Adaptor protein ClpS, core | Domain | |
IPR014719 | Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like | Homologous Superfamily | |
IPR022935 | ATP-dependent Clp protease adaptor protein ClpS | Family |