Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1r0ma1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like D-glucarate dehydratase-like N-acylamino acid racemase (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Ad1r0ma2 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like Enolase N-terminal domain-like N-acylamino acid racemase (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Bd1r0mb1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like D-glucarate dehydratase-like N-acylamino acid racemase (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Bd1r0mb2 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like Enolase N-terminal domain-like N-acylamino acid racemase (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Cd1r0mc1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like D-glucarate dehydratase-like N-acylamino acid racemase (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Cd1r0mc2 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like Enolase N-terminal domain-like N-acylamino acid racemase (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Dd1r0md1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like D-glucarate dehydratase-like N-acylamino acid racemase (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Dd1r0md2 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like Enolase N-terminal domain-like N-acylamino acid racemase (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyEnolase N-terminal domain-like 8044116 3001064 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyEnolase C-terminal domain-like 8044114 3000476 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyEnolase C-terminal domain-like 8044114 3000476 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyEnolase N-terminal domain-like 8044116 3001064 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyEnolase N-terminal domain-like 8044116 3001064 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyEnolase C-terminal domain-like 8044114 3000476 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyEnolase C-terminal domain-like 8044114 3000476 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyEnolase N-terminal domain-like 8044116 3001064 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AMR_MLE_Ne1r0mA1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
AMR_MLE_C_1e1r0mA2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
BMR_MLE_Ne1r0mB1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
BMR_MLE_C_1e1r0mB2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
CMR_MLE_Ne1r0mC1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
CMR_MLE_C_1e1r0mC2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
DMR_MLE_Ne1r0mD1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
DMR_MLE_C_1e1r0mD2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF02746Mandelate racemase / muconate lactonizing enzyme, N-terminal domain (MR_MLE_N)Mandelate racemase / muconate lactonizing enzyme, N-terminal domainSCOP reports fold similarity with enolase N-terminal domain.Domain
A, B, C, D
PF13378Enolase C-terminal domain-like (MR_MLE_C)Enolase C-terminal domain-likeThis domain appears at the C-terminus of many of the proteins that carry the MR_MLE_N Pfam:PF02746 domain. EC:4.2.1.40.Domain

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
N-succinylamino acid racemase  M-CSA #377

N-succinylamino acid racemase (NAAAR) catalyses the racemisation of N-succinyl-D/L-amino acids, as part of a pathway for the conversion of D- to L-amino acids. NAAARs act on a broad range of N-acylamino acids rather than amino acids. This function is of significant interest in industry where enantiopure amino acids are inportant as chiral building blocks for antibiotics, herbicides, and drugs. The experimentally characterised enzyme from Geobacillus kaustophilus efficiently catalyses the racemisation of hydrophobic, polar, and some basic N-succinyl-D/L-amino acids.

These enzymes are members of the enolase superfamily and highly similar to enzymes in the o-succinylbenzoate synthase family, and some may also function biologically as OSBSs. Although the reaction catalyzed by this family is similar to that catalyzed by the NSAR2 family (differing only in the preference of N-succinyl arginine/lysine for NSAR2 versus N-succinyl hydrophobic amino acids for NSAR), phylogenetic analysis suggests that these two families have independent evolutionary origins within the enolase superfamily. Not surprisingly, the amino acids responsible for substrate recognition appear to differ between the two families.

Defined by 8 residues: SER:A-142LYS:A-168LYS:A-170ASP:A-195GLU:A-220ASP:A-245LYS:A-269GLY:A-297
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