Structure of fused docking domains from the erythromycin polyketide synthase (DEBS), a model for the interaction between DEBS 2 and DEBS 3: The A domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d1pzqb1 | All alpha proteins | Dimerisation interlock | Docking domain A of the erythromycin polyketide synthase (DEBS) | Docking domain A of the erythromycin polyketide synthase (DEBS) | Erythronolide synthase | (Saccharopolyspora erythraea ) [TaxId: 1836 ], | SCOPe (2.08) |
| B | d1pzqb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Saccharopolyspora erythraea ) [TaxId: 1836 ], | SCOPe (2.08) |
| A | d1pzqa1 | All alpha proteins | Dimerisation interlock | Docking domain A of the erythromycin polyketide synthase (DEBS) | Docking domain A of the erythromycin polyketide synthase (DEBS) | Erythronolide synthase | (Saccharopolyspora erythraea ) [TaxId: 1836 ], | SCOPe (2.08) |
| A | d1pzqa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Saccharopolyspora erythraea ) [TaxId: 1836 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Docking domain A of the erythromycin polyketide synthase (DEBS) | 8039464 | 3000887 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Docking domain A of the erythromycin polyketide synthase (DEBS) | 8027085 | 4000653 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Docking domain A of the erythromycin polyketide synthase (DEBS) | 8039464 | 3000887 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Tautomerase | e1pzqB1 | A: beta barrels | X: Repetitive alpha hairpins | H: ARM repeat | T: ARM repeat | F: Tautomerase | ECOD (v294.2) |
| A | Erythro-docking | e1pzqA1 | A: alpha bundles | X: Dimerisation interlock | H: Docking domain A of the erythromycin polyketide synthase (DEBS) | T: Docking domain A of the erythromycin polyketide synthase (DEBS) | F: Erythro-docking | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 1.20.5.1140 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Docking domain of the erythromycin polyketide synthase (DEBS) | CATH (4.3.0) |
| A | 1.20.5.1140 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Docking domain of the erythromycin polyketide synthase (DEBS) | CATH (4.3.0) |














