1PJ2
Crystal structure of human mitochondrial NAD(P)+-dependent malic enzyme in a pentary complex with natural substrate malate, cofactor NADH, Mn++, and allosteric activator fumarate
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | MtdA-like | 8056187 | 3000046 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | MtdA-like | 8056187 | 3000046 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | MtdA-like | 8056187 | 3000046 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | MtdA-like | 8056187 | 3000046 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Malic_M | e1pj2A3 | A: alpha arrays | X: C-terminal domain of Malic enzyme (From Topology) | H: C-terminal domain of Malic enzyme (From Topology) | T: C-terminal domain of Malic enzyme | F: Malic_M | ECOD (1.6) |
A | Malic_M | e1pj2A1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: Malic_M | ECOD (1.6) |
A | malic | e1pj2A2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Aminoacid dehydrogenase-like, N-terminal domain | F: malic | ECOD (1.6) |
C | Malic_M | e1pj2C3 | A: alpha arrays | X: C-terminal domain of Malic enzyme (From Topology) | H: C-terminal domain of Malic enzyme (From Topology) | T: C-terminal domain of Malic enzyme | F: Malic_M | ECOD (1.6) |
C | Malic_M | e1pj2C2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: Malic_M | ECOD (1.6) |
C | malic | e1pj2C1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Aminoacid dehydrogenase-like, N-terminal domain | F: malic | ECOD (1.6) |
D | Malic_M | e1pj2D2 | A: alpha arrays | X: C-terminal domain of Malic enzyme (From Topology) | H: C-terminal domain of Malic enzyme (From Topology) | T: C-terminal domain of Malic enzyme | F: Malic_M | ECOD (1.6) |
D | Malic_M | e1pj2D1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: Malic_M | ECOD (1.6) |
D | malic | e1pj2D3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Aminoacid dehydrogenase-like, N-terminal domain | F: malic | ECOD (1.6) |
B | Malic_M | e1pj2B1 | A: alpha arrays | X: C-terminal domain of Malic enzyme (From Topology) | H: C-terminal domain of Malic enzyme (From Topology) | T: C-terminal domain of Malic enzyme | F: Malic_M | ECOD (1.6) |
B | Malic_M | e1pj2B3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: Malic_M | ECOD (1.6) |
B | malic | e1pj2B2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Aminoacid dehydrogenase-like, N-terminal domain | F: malic | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.10380 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Malic enzyme, N-terminal domain | CATH (4.3.0) |
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
C | 3.40.50.10380 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Malic enzyme, N-terminal domain | CATH (4.3.0) |
C | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
D | 3.40.50.10380 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Malic enzyme, N-terminal domain | CATH (4.3.0) |
D | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B | 3.40.50.10380 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Malic enzyme, N-terminal domain | CATH (4.3.0) |
B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012302 | Malic enzyme, NAD-binding | Domain | |
IPR012301 | Malic enzyme, N-terminal domain | Domain | |
IPR046346 | Aminoacid dehydrogenase-like, N-terminal domain superfamily | Homologous Superfamily | |
IPR015884 | Malic enzyme, conserved site | Conserved Site | |
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR037062 | Malic enzyme, N-terminal domain superfamily | Homologous Superfamily | |
IPR001891 | Malic oxidoreductase | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
P23368 | :