1PCV
Crystal structure of osmotin, a plant antifungal protein
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1pcva_ | All beta proteins | Osmotin, thaumatin-like protein | Osmotin, thaumatin-like protein | Osmotin, thaumatin-like protein | Osmotin | (Nicotiana tabacum ) [TaxId: 4097 ], | SCOPe (2.08) |
B | d1pcvb_ | All beta proteins | Osmotin, thaumatin-like protein | Osmotin, thaumatin-like protein | Osmotin, thaumatin-like protein | Osmotin | (Nicotiana tabacum ) [TaxId: 4097 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Osmotin, thaumatin-like protein | 8026150 | 4002584 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Osmotin/thaumatin-like | 8038529 | 3001451 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Osmotin/thaumatin-like | 8038529 | 3001451 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Thaumatin_N | e1pcvA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Osmotin-like (From Topology) | T: Osmotin-like | F: Thaumatin_N | ECOD (1.6) |
A | Thaumatin_C | e1pcvA1 | A: a+b two layers | X: Laminaripentaose-producing beta-1,3-glucanase insertion domain (From Topology) | H: Laminaripentaose-producing beta-1,3-glucanase insertion domain (From Topology) | T: Laminaripentaose-producing beta-1,3-glucanase insertion domain | F: Thaumatin_C | ECOD (1.6) |
B | Thaumatin_N | e1pcvB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Osmotin-like (From Topology) | T: Osmotin-like | F: Thaumatin_N | ECOD (1.6) |
B | Thaumatin_C | e1pcvB2 | A: a+b two layers | X: Laminaripentaose-producing beta-1,3-glucanase insertion domain (From Topology) | H: Laminaripentaose-producing beta-1,3-glucanase insertion domain (From Topology) | T: Laminaripentaose-producing beta-1,3-glucanase insertion domain | F: Thaumatin_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.110.10 | Mainly Beta | Sandwich | Thaumatin | Thaumatin | CATH (4.3.0) |
B | 2.60.110.10 | Mainly Beta | Sandwich | Thaumatin | Thaumatin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00314 | Thaumatin family (Thaumatin) | Thaumatin family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
osmotin | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017949 | Thaumatin, conserved site | Conserved Site | |
IPR001938 | Thaumatin family | Family | |
IPR037176 | Osmotin/thaumatin-like superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Monotopic/peripheral | All beta monotopic/peripheral | Membrane attack complex superfamily | Thaumatin |