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Crystal structure of a putative PII-like signaling protein (TM0021) from Thermotoga maritima at 2.50 A resolution


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1o51a1 Alpha and beta proteins (a+b) Ferredoxin-like GlnB-like DUF190/COG1993 Hypothetical protein TM0021 (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Ad1o51a2 Artifacts Tags Tags Tags N-terminal Tags (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyDUF190/COG1993 8024831 4000638 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyGlnB-like 8037210 3001165 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADUF190e1o51A1 A: a+b two layersX: Alpha-beta plaitsH: GlnB-likeT: GlnB-likeF: DUF190ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.70.120 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02641PII-like signalling protein (UPF0166)PII-like signalling proteinThis entry represents a small domain of approximately 100 residues, classified as UPF0166, found predominantly in Bacteria (Actinomycetota and Pseudomonadota) and also in Archaea. The domain adopts a PII-like fold and is a member of the GlnB-like sup ...This entry represents a small domain of approximately 100 residues, classified as UPF0166, found predominantly in Bacteria (Actinomycetota and Pseudomonadota) and also in Archaea. The domain adopts a PII-like fold and is a member of the GlnB-like superfamily (CL0089). The crystal structure of TM0021 (Swiss:Q9WXM9) from Thermotoga maritima has been determined at 2.5 Angstrom resolution [1]. In Pelobacter carbinolicus, a member of this family (Pcar_0334) has been described as a possible modulator of transport, distantly related to the GlnK protein that controls the ammonium transport channel. Some proteins contain tandem repeats of this domain. The domain is predicted to form a homotrimer. The function of this domain remains to be determined.
Domain