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 1NR2 | pdb_00001nr2

High resolution crystal structures of thymus and activation-regulated chemokine

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1nr2a_ Alpha and beta proteins (a+b) IL8-like Interleukin 8-like chemokines Interleukin 8-like chemokines Thymus and activation-regulated chemokine, TRAC ( ) [TaxId: ], (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd1nr2b_ Alpha and beta proteins (a+b) IL8-like Interleukin 8-like chemokines Interleukin 8-like chemokines Thymus and activation-regulated chemokine, TRAC ( ) [TaxId: ], (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyInterleukin 8-like chemokines 8036926 3001955 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyInterleukin 8-like chemokines 8036926 3001955 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARhve1nr2A1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: RhvECOD (v295.2)
BRhve1nr2B1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: RhvECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.50.40 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) CATH (4.3.0)
B2.40.50.40 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00048Small cytokines (intecrine/chemokine), interleukin-8 like (IL8)Small cytokines (intecrine/chemokine), interleukin-8 likeIncludes a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity. Structure contains two highly conserved disulfide bonds. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Thymus and activation-regulated chemokine

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR001811Chemokine interleukin-8-like domainDomain
A, B
IPR039809Chemokine beta/gamma/deltaFamily
A, B
IPR036048Chemokine interleukin-8-like superfamilyHomologous Superfamily
A, B
IPR000827CC chemokine, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B
:  Q92583