1NO7

Structure of the Large Protease Resistant Upper Domain of VP5, the Major Capsid Protein of Herpes Simplex Virus-1

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1no7a_ Multi-domain proteins (alpha and beta) Major capsid protein VP5 Major capsid protein VP5 Major capsid protein VP5 Major capsid protein VP5 Herpes simplex virus type 1 (Human alphaherpesvirus 1 ) [TaxId: 10298 ], SCOPe (2.08)
Bd1no7b_ Multi-domain proteins (alpha and beta) Major capsid protein VP5 Major capsid protein VP5 Major capsid protein VP5 Major capsid protein VP5 Herpes simplex virus type 1 (Human alphaherpesvirus 1 ) [TaxId: 10298 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyMajor capsid protein VP5 8024486 4001666 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyHerpes simplex virus MCP-like 8036865 3000230 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyHerpes simplex virus MCP-like 8036865 3000230 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHerpes_MCPe1no7A1 A: a+b complex topologyX: Major capsid protein VP5 (From Topology)H: Major capsid protein VP5 (From Topology)T: Major capsid protein VP5F: Herpes_MCPECOD (1.6)
BHerpes_MCPe1no7B1 A: a+b complex topologyX: Major capsid protein VP5 (From Topology)H: Major capsid protein VP5 (From Topology)T: Major capsid protein VP5F: Herpes_MCPECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Major capsid protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR000912Herpesvirus major capsid proteinFamily
A, B
IPR023233Herpesvirus major capsid protein, upper domain superfamilyHomologous Superfamily