1NIV | pdb_00001niv

MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM SNOWDROP (GALANTHUS NIVALIS) BULBS IN COMPLEX WITH MANNOSE-ALPHA 1,3-METHYL-D-MANNOSE

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B [auth C]	d1nivc_	All beta proteins	beta-Prism II	alpha-D-mannose-specific plant lectins	alpha-D-mannose-specific plant lectins	Lectin (agglutinin)	(Galanthus nivalis ) [TaxId: 4670 ],	SCOPe (2.08)
A	d1niva_	All beta proteins	beta-Prism II	alpha-D-mannose-specific plant lectins	alpha-D-mannose-specific plant lectins	Lectin (agglutinin)	(Galanthus nivalis ) [TaxId: 4670 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth C]	SCOP2B Superfamily	alpha-D-mannose-specific plant lectins	8043029	3001730	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	alpha-D-mannose-specific plant lectins	8043029	3001730	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth C]	Ldl_recept_b	e1nivC1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: Phage tail fiber protein trimerization domain	T: Phage tail fiber protein trimerization domain	F: Ldl_recept_b	ECOD (v295.2)
A	Ldl_recept_b	e1nivA1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: Phage tail fiber protein trimerization domain	T: Phage tail fiber protein trimerization domain	F: Ldl_recept_b	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B [auth C]	2.90.10.10	Mainly Beta	Orthogonal Prism	Agglutinin, subunit A	Bulb-type lectin domain	CATH (4.3.0)
A	2.90.10.10	Mainly Beta	Orthogonal Prism	Agglutinin, subunit A	Bulb-type lectin domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth C]	AGGLUTININ	binding D-mannose binding monosaccharide binding carbohydrate binding small molecule binding	biological process involved in interspecies interaction between organisms response to stimulus response to other organism response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C]	IPR001480	Bulb-type lectin domain	Domain
A, B [auth C]	IPR036426	Bulb-type lectin domain superfamily	Homologous Superfamily