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 1NFJ | pdb_00001nfj

Structure of a Sir2 substrate, alba, reveals a mechanism for deactylation-induced enhancement of DNA-binding

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1nfja_ Alpha and beta proteins (a+b) IF3-like AlbA-like DNA-binding protein AlbA DNA-binding protein AlbA (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyDNA-binding protein AlbA 8024440 4003254 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyAlbA-like 8036819 3000507 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHSP90,HATPase_c_3e1nfjA1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: HSP90,HATPase_c_3ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.110.20 Alpha Beta 2-Layer Sandwich Translation Initiation Factor IF3 Alba-like domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01918Alba (Alba)AlbaAlba is a novel chromosomal protein that coats archaeal DNA without compacting it. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
conserved hypothetical protein AF1956 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036882Alba-like domain superfamilyHomologous Superfamily
IPR013795DNA/RNA-binding protein AlbaFamily
IPR002775DNA/RNA-binding protein Alba-likeDomain