1N08
Crystal Structure of Schizosaccharomyces pombe Riboflavin Kinase Reveals a Novel ATP and Riboflavin Binding Fold
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1n08a_ | All beta proteins | Reductase/isomerase/elongation factor common domain | Riboflavin kinase-like | ATP-dependent riboflavin kinase-like | Riboflavin kinase | fission yeast (Schizosaccharomyces pombe ) [TaxId: 4896 ], | SCOPe (2.08) |
B | d1n08b_ | All beta proteins | Reductase/isomerase/elongation factor common domain | Riboflavin kinase-like | ATP-dependent riboflavin kinase-like | Riboflavin kinase | fission yeast (Schizosaccharomyces pombe ) [TaxId: 4896 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | ATP-dependent riboflavin kinase-like | 8031550 | 4002669 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Riboflavin kinase-like | 8043928 | 3000067 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Riboflavin kinase-like | 8043928 | 3000067 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Flavokinase | e1n08A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Flavokinase | ECOD (1.6) |
B | Flavokinase | e1n08B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Flavokinase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.30.30 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
B | 2.40.30.30 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01687 | Riboflavin kinase (Flavokinase) | Riboflavin kinase | This family represents the C-terminal region of the bifunctional riboflavin biosynthesis protein known as RibC in Bacillus subtilis. The RibC protein from Bacillus subtilis has both flavokinase and flavin adenine dinucleotide synthetase (FAD-synthet ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015865 | Riboflavin kinase domain, bacterial/eukaryotic | Domain | |
IPR023465 | Riboflavin kinase domain superfamily | Homologous Superfamily | |
IPR023468 | Riboflavin kinase | Family |