1M3K | pdb_00001m3k

biosynthetic thiolase, inactive C89A mutant

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d1m3kd2	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	Thiolase-related	Biosynthetic thiolase, C-terminal domain	(Zoogloea ramigera ) [TaxId: 350 ],	SCOPe (2.08)
D	d1m3kd1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	Thiolase-related	Biosynthetic thiolase, N-terminal domain	(Zoogloea ramigera ) [TaxId: 350 ],	SCOPe (2.08)
C	d1m3kc2	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	Thiolase-related	Biosynthetic thiolase, C-terminal domain	(Zoogloea ramigera ) [TaxId: 350 ],	SCOPe (2.08)
C	d1m3kc1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	Thiolase-related	Biosynthetic thiolase, N-terminal domain	(Zoogloea ramigera ) [TaxId: 350 ],	SCOPe (2.08)
B	d1m3kb2	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	Thiolase-related	Biosynthetic thiolase, C-terminal domain	(Zoogloea ramigera ) [TaxId: 350 ],	SCOPe (2.08)
B	d1m3kb1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	Thiolase-related	Biosynthetic thiolase, N-terminal domain	(Zoogloea ramigera ) [TaxId: 350 ],	SCOPe (2.08)
A	d1m3ka2	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	Thiolase-related	Biosynthetic thiolase, C-terminal domain	(Zoogloea ramigera ) [TaxId: 350 ],	SCOPe (2.08)
A	d1m3ka1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	Thiolase-related	Biosynthetic thiolase, N-terminal domain	(Zoogloea ramigera ) [TaxId: 350 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Thiolase-like	8043265	3000122	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Thiolase-like	8043264	3000122	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Thiolase-like	8043265	3000122	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Thiolase-like	8043264	3000122	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Thiolase-like	8043265	3000122	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Thiolase-like	8043264	3000122	SCOP2B (2022-06-29)
A	SCOP2 Family	Thiolase-related	8030885	4000245	SCOP2 (2022-06-29)
A	SCOP2 Family	Thiolase-related	8030886	4000245	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Thiolase-like	8043264	3000122	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Thiolase-like	8043265	3000122	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Chal_sti_synt_N	e1m3kD1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: Chal_sti_synt_N	ECOD (develop294)
C	Chal_sti_synt_N	e1m3kC1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: Chal_sti_synt_N	ECOD (develop294)
B	Chal_sti_synt_N	e1m3kB1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: Chal_sti_synt_N	ECOD (develop294)
A	Thiolase_N	e1m3kA1	A: alpha bundles	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Thiolase-like	F: Thiolase_N	ECOD (develop294)
A	Thiolase_C	e1m3kA2	A: alpha bundles	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Thiolase-like	F: Thiolase_C	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (4.3.0)
C	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (4.3.0)
B	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (4.3.0)
A	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Acetyl-CoA acetyltransferase	acetyl-CoA C-acetyltransferase activity acetyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity acetyl-CoA C-acyltransferase activity C-acyltransferase activity catalytic activity C-acetyltransferase activity	poly-hydroxybutyrate biosynthetic process biosynthetic process poly(hydroxyalkanoate) biosynthetic process metabolic process cellular process poly(hydroxyalkanoate) metabolic process poly-hydroxybutyrate metabolic process small molecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR016039	Thiolase-like	Homologous Superfamily
A, B, C, D	IPR020617	Thiolase, C-terminal	Domain
A, B, C, D	IPR020616	Thiolase, N-terminal	Domain
A, B, C, D	IPR020613	Thiolase, conserved site	Conserved Site
A, B, C, D	IPR020610	Thiolase, active site	Active Site
A, B, C, D	IPR020615	Thiolase, acyl-enzyme intermediate active site	Active Site
A, B, C, D	IPR002155	Thiolase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.