Crystal Structure of the K3L Protein From Vaccinia Virus (Wisconsin Strain)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d1luzb_ | All beta proteins | OB-fold | Nucleic acid-binding proteins | Cold shock DNA-binding domain-like | Viral structural mimic of eIF2alpha | (Vaccinia virus WR ) [TaxId: 10254 ], | SCOPe (2.08) |
| A | d1luza_ | All beta proteins | OB-fold | Nucleic acid-binding proteins | Cold shock DNA-binding domain-like | Viral structural mimic of eIF2alpha | (Vaccinia virus WR ) [TaxId: 10254 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Nucleic acid-binding proteins | 8041467 | 3000135 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Cold shock DNA-binding domain-like | 8029088 | 4001909 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Nucleic acid-binding proteins | 8041467 | 3000135 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Stap_Strp_toxin | e1luzB1 | A: beta barrels | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: Stap_Strp_toxin | ECOD (v294.2) |
| A | S1 | e1luzA1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: S1 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
| A | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00575 | S1 RNA binding domain (S1) | S1 RNA binding domain | The S1 domain occurs in a wide range of RNA associated proteins. It is structurally similar to cold shock protein which binds nucleic acids. The S1 domain has an OB-fold structure. | Domain |














